RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 CABP7Q86V35 215 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 CKAP2LQ8IYA6 745 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 FANCBQ8NB91 859 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 MAP4K1Q92918 833 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 MAP7D2Q96T17 732 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 ANO3Q9BYT9 981 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 SFXN1Q9H9B4 322 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 DACT1Q9NYF0 836 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 KMT2BQ9UMN6 2715 aaPredicted RBP15.78■□□□□ 0.12
SPCS3-204ENST00000513139 MTCL1Q9Y4B5 1905 aaKnown RBP15.78■□□□□ 0.12
SPCS3-204ENST00000513139 DDX39AO00148 427 aaKnown RBP15.77■□□□□ 0.12
SPCS3-204ENST00000513139 IPO5O00410 1097 aaKnown RBP15.77■□□□□ 0.12
SPCS3-204ENST00000513139 ZNF76P36508 570 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 METAP2P50579 478 aaKnown RBP eCLIP15.77■□□□□ 0.12
SPCS3-204ENST00000513139 ZNF746Q6NUN9 644 aaPredicted RBP15.77■□□□□ 0.12
SPCS3-204ENST00000513139 KANK3Q6NY19 840 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 TMC5Q6UXY8 1006 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 CENPQQ7L2Z9 268 aaPredicted RBP15.77■□□□□ 0.12
SPCS3-204ENST00000513139 SKAP1Q86WV1 359 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 SMAP1Q8IYB5 467 aaPredicted RBP15.77■□□□□ 0.12
SPCS3-204ENST00000513139 SIX5Q8N196 739 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 CCDC82Q8N4S0 544 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 LINC01465Q8N7H1 131 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 RNF169Q8NCN4 708 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 HELQQ8TDG4 1101 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 RMDN1Q96DB5 314 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 GLT8D2Q9H1C3 349 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 KCNK12Q9HB15 430 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 IGSF9Q9P2J2 1179 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 FBXL21Q9UKT6 434 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 AKT3Q9Y243 479 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 SLC12A7Q9Y666 1083 aa15.77■□□□□ 0.12
SPCS3-204ENST00000513139 NT5C1B-RDH14C9J2C7 533 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 SGSM2O43147 1006 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 GSPT1P15170 499 aaKnown RBP15.76■□□□□ 0.11
SPCS3-204ENST00000513139 CD44P16070 742 aaKnown RBP15.76■□□□□ 0.11
SPCS3-204ENST00000513139 RXRAP19793 462 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 CLCN3P51790 818 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 ADCY7P51828 1080 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 NAPAP54920 295 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 TTC22Q5TAA0 569 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 WWC2Q6AWC2 1192 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 EFCAB12Q6NXP0 572 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 C15orf39Q6ZRI6 1047 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 DGLUCYQ7Z3D6 616 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 PLA2G4DQ86XP0 818 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 KCNG4Q8TDN1 519 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 IGSF21Q96ID5 467 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 PGBD1Q96JS3 809 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 FAM167AQ96KS9 214 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 TRAIPQ9BWF2 469 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 TBC1D22BQ9NU19 505 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 WNT16Q9UBV4 365 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 STK39Q9UEW8 545 aa15.76■□□□□ 0.11
SPCS3-204ENST00000513139 ACACBO00763 2458 aa15.75■□□□□ 0.11
SPCS3-204ENST00000513139 IGLV3-22A0A075B6J6 115 aa15.75■□□□□ 0.11
SPCS3-204ENST00000513139 MED19A0JLT2 244 aaPredicted RBP15.75■□□□□ 0.11
SPCS3-204ENST00000513139 FAM86B1E9PN63 330 aa15.75■□□□□ 0.11
SPCS3-204ENST00000513139 hCG_1984214I3L0E3 225 aa15.75■□□□□ 0.11
SPCS3-204ENST00000513139 PSAPP07602 524 aa15.75■□□□□ 0.11
SPCS3-204ENST00000513139 FAM86B2P0C5J1 330 aa15.75■□□□□ 0.11
SPCS3-204ENST00000513139 DARSP14868 501 aaKnown RBP15.75■□□□□ 0.11
SPCS3-204ENST00000513139 CLK2P49760 499 aaKnown RBP15.75■□□□□ 0.11
SPCS3-204ENST00000513139 PUM1Q14671 1186 aaKnown RBP eCLIP15.75■□□□□ 0.11
SPCS3-204ENST00000513139 TYW1BQ6NUM6 668 aa15.75■□□□□ 0.11
SPCS3-204ENST00000513139 ZNF713Q8N859 430 aaPredicted RBP15.75■□□□□ 0.11
SPCS3-204ENST00000513139 AUTS2Q8WXX7 1259 aa15.75■□□□□ 0.11
SPCS3-204ENST00000513139 CHST12Q9NRB3 414 aa15.75■□□□□ 0.11
SPCS3-204ENST00000513139 PCDHA10Q9Y5I2 948 aa15.75■□□□□ 0.11
SPCS3-204ENST00000513139 MIA3Q5JRA6 1907 aa15.74■□□□□ 0.11
SPCS3-204ENST00000513139 ZC3H11AO75152 810 aaKnown RBP eCLIP15.74■□□□□ 0.11
SPCS3-204ENST00000513139 CYP3A4P08684 503 aa15.74■□□□□ 0.11
SPCS3-204ENST00000513139 GPC3P51654 580 aa15.74■□□□□ 0.11
SPCS3-204ENST00000513139 CDC42EP1Q00587 391 aa15.74■□□□□ 0.11
SPCS3-204ENST00000513139 LETM2Q2VYF4 491 aa15.74■□□□□ 0.11
SPCS3-204ENST00000513139 SGMS1Q86VZ5 419 aa15.74■□□□□ 0.11
SPCS3-204ENST00000513139 TMEM173Q86WV6 379 aaPredicted RBP15.74■□□□□ 0.11
SPCS3-204ENST00000513139 CRYGNQ8WXF5 182 aa15.74■□□□□ 0.11
SPCS3-204ENST00000513139 RNF25Q96BH1 459 aaPredicted RBP15.74■□□□□ 0.11
SPCS3-204ENST00000513139 RBM8AQ9Y5S9 174 aaKnown RBP15.74■□□□□ 0.11
SPCS3-204ENST00000513139 CNTNAP5Q8WYK1 1306 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 SMCO2A6NFE2 343 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 SKIP12755 728 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 PHKA2P46019 1235 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 CLCN4P51793 760 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 SETQ01105 290 aaPredicted RBP15.73■□□□□ 0.11
SPCS3-204ENST00000513139 NONOQ15233 471 aaKnown RBP eCLIP15.73■□□□□ 0.11
SPCS3-204ENST00000513139 PTPN14Q15678 1187 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 ZC3H14Q6PJT7 736 aaKnown RBP15.73■□□□□ 0.11
SPCS3-204ENST00000513139 CYP26C1Q6V0L0 522 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 KIAA2013Q8IYS2 634 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 LRRC71Q8N4P6 559 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 CMASQ8NFW8 434 aaPredicted RBP15.73■□□□□ 0.11
SPCS3-204ENST00000513139 NXPE3Q969Y0 559 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 ZNF577Q9BSK1 485 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 EMILIN2Q9BXX0 1053 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 RHOBTB2Q9BYZ6 727 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 RBM28Q9NW13 759 aaKnown RBP15.73■□□□□ 0.11
SPCS3-204ENST00000513139 TCEAL9Q9UHQ7 104 aa15.73■□□□□ 0.11
SPCS3-204ENST00000513139 SPTBN2O15020 2390 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms