RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 SDC4P31431 198 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 DCAF4L1Q3SXM0 396 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 CEP55Q53EZ4 464 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 CEP85LQ5SZL2 805 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 FAM173BQ6P4H8 233 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 RHOT2Q8IXI1 618 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 GPD1LQ8N335 351 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 SH3KBP1Q96B97 665 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 RBM41Q96IZ5 413 aaKnown RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 HINFPQ9BQA5 517 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 TMEM39AQ9NV64 488 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 UBE4BO95155 1302 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 RGS16O15492 202 aaPredicted RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 FBXW4P57775 412 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 KIF23Q02241 960 aaPredicted RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 VSIG1Q86XK7 387 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 CCDC13Q8IYE1 715 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 KRT222Q8N1A0 295 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 ENTPD7Q9NQZ7 604 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 CYP26B1Q9NR63 512 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 SAR1BQ9Y6B6 198 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 MED14O60244 1454 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 CCDC151A5D8V7 595 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 GOLGA8MH3BSY2 632 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 COBLO75128 1261 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 IGKV5-2P06315 115 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 PLCG1P19174 1290 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 PLD1Q13393 1074 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 FAM117BQ6P1L5 589 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 TEX2Q8IWB9 1127 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 RNF149Q8NC42 400 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 DPF2Q92785 391 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 MCUR1Q96AQ8 359 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 ZBTB18Q99592 522 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 FAM213AQ9BRX8 229 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 KANSL3Q9P2N6 904 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 AGO2Q9UKV8 859 aaKnown RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 DIS3Q9Y2L1 958 aaKnown RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 ERICH4A6NGS2 130 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 NVLO15381 856 aaKnown RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 RNASEH1O60930 286 aaKnown RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 TTC4O95801 387 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 NDUFB10O96000 172 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 SERPINB6P35237 376 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 PI16Q6UXB8 463 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 B4GALNT4Q76KP1 1039 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 NSUN7Q8NE18 718 aaKnown RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.55□□□□□ -1.68
VCAN-209ENST00000513016 TDRD7Q8NHU6 1098 aaKnown RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 FAM71BQ8TC56 605 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 MRPS31Q92665 395 aaKnown RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 MAGOHBQ96A72 148 aaKnown RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 SLITRK1Q96PX8 696 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 EPAS1Q99814 870 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 MTG1Q9BT17 334 aaPredicted RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 EMILIN2Q9BXX0 1053 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 BARHL2Q9NY43 387 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 GCNT4Q9P109 453 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 RWDD2AQ9UIY3 292 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 CASQ2O14958 399 aaPredicted RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 SLC16A4O15374 487 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 SERPING1P05155 500 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 SMARCA1P28370 1054 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 STX2P32856 288 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 HSD17B4P51659 736 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 FKBP1BP68106 108 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 CDR2Q01850 454 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ZNF235Q14590 738 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 LRRC41Q15345 812 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 SGO2Q562F6 1265 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 FRA10AC1Q70Z53 315 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 SHCBP1Q8NEM2 672 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 GPRASP2Q96D09 838 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ZNF512BQ96KM6 892 aaPredicted RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 VCX3AQ9NNX9 186 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 THG1LQ9NWX6 298 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 MTMR4Q9NYA4 1195 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 KLHL8Q9P2G9 620 aaPredicted RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 RNF14Q9UBS8 474 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 PCDHA7Q9UN72 937 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 RIMBP3CA6NJZ7 1639 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 RIMBP3BA6NNM3 1639 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 RIMBP3Q9UFD9 1639 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ASMTLO95671 621 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 EYA4O95677 639 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 BRD1O95696 1058 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ESRRBO95718 433 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ATXN3P54252 364 aaPredicted RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 SNRPFP62306 86 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 PHEXP78562 749 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 TAF1BQ53T94 588 aaPredicted RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 NOTUMQ6P988 496 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 CD302Q8IX05 232 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 KLC2Q9H0B6 622 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ZKSCAN5Q9Y2L8 839 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 GTF2F1P35269 517 aaKnown RBP eCLIP4.54□□□□□ -1.68
VCAN-209ENST00000513016 ZNF543Q08ER8 600 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 TMEM132DQ14C87 1099 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 OOSP2Q86WS3 158 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ASAP3Q8TDY4 903 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms