RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 MYOCDQ8IZQ8 938 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 DEPTORQ8TB45 409 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 U2AF1L4Q8WU68 220 aaKnown RBP11.98□□□□□ -0.49
PFDN1-204ENST00000512707 TRAPPC12Q8WVT3 735 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 SPIRE2Q8WWL2 714 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 TMEM143Q96AN5 459 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 SCLT1Q96NL6 688 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 CEP89Q96ST8 783 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 SLC39A2Q9NP94 309 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 GPRC5CQ9NQ84 441 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 KMT5AQ9NQR1 393 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 XPNPEP1Q9NQW7 623 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 STARD7Q9NQZ5 370 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 TBC1D7Q9P0N9 293 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 SUCLA2Q9P2R7 463 aaPredicted RBP11.98□□□□□ -0.49
PFDN1-204ENST00000512707 HDAC6Q9UBN7 1215 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 GTF2IRD1Q9UHL9 959 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 OGDHLQ9ULD0 1010 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 AKT3Q9Y243 479 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 WDR81Q562E7 1941 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 SMIM35A0A1B0GVV1 85 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 BICDL2A1A5D9 508 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 LRRIQ4A6NIV6 560 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 SFI1A8K8P3 1242 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 M0QZ92 97 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 EIF3DO15371 548 aaKnown RBP eCLIP11.97□□□□□ -0.49
PFDN1-204ENST00000512707 SGPL1O95470 568 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 CHRM1P11229 460 aaPredicted RBP11.97□□□□□ -0.49
PFDN1-204ENST00000512707 CYP2C9P11712 490 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 ERCC5P28715 1186 aaPredicted RBP11.97□□□□□ -0.49
PFDN1-204ENST00000512707 ZNF165P49910 485 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 EFNA5P52803 228 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 EHHADHQ08426 723 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 COBLL1Q53SF7 1204 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 ZBTB8OSQ8IWT0 167 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 DAW1Q8N136 415 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 GUF1Q8N442 669 aaKnown RBP11.97□□□□□ -0.49
PFDN1-204ENST00000512707 LRRC71Q8N4P6 559 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 ANKLE1Q8NAG6 615 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 PRPF31Q8WWY3 499 aaKnown RBP11.97□□□□□ -0.49
PFDN1-204ENST00000512707 HVCN1Q96D96 273 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 DHTKD1Q96HY7 919 aaPredicted RBP11.97□□□□□ -0.49
PFDN1-204ENST00000512707 TSG101Q99816 390 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 DNAJC25Q9H1X3 360 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 C2orf40Q9H1Z8 148 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 EXOC7Q9UPT5 735 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 PCDHA2Q9Y5H9 948 aa11.97□□□□□ -0.49
PFDN1-204ENST00000512707 MBLAC1A4D2B0 266 aaPredicted RBP11.96□□□□□ -0.49
PFDN1-204ENST00000512707 SMTNL1A8MU46 457 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 BECN2A8MW95 431 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 ARL2P36404 184 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 PHKA2P46019 1235 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 NPTX2P47972 431 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 CLCN3P51790 818 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 LAMTOR4Q0VGL1 99 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 STRN3Q13033 797 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 STK4Q13043 487 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 PAK1Q13153 545 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 TPD52L1Q16890 204 aaPredicted RBP11.96□□□□□ -0.49
PFDN1-204ENST00000512707 KLHL10Q6JEL2 608 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 HAUS6Q7Z4H7 955 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 RHPN2Q8IUC4 686 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 SMYD4Q8IYR2 804 aaPredicted RBP11.96□□□□□ -0.49
PFDN1-204ENST00000512707 SYCP3Q8IZU3 236 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 NME8Q8N427 588 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 FAM200AQ8TCP9 573 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 FUCA2Q9BTY2 467 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 CRISPLD2Q9H0B8 497 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 FAM49AQ9H0Q0 323 aaPredicted RBP11.96□□□□□ -0.49
PFDN1-204ENST00000512707 ST6GALNAC4Q9H4F1 302 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 TMEM206Q9H813 350 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 GDAQ9Y2T3 454 aa11.96□□□□□ -0.49
PFDN1-204ENST00000512707 FRMPD3Q5JV73 1810 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 MROH7Q68CQ1 1323 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 GOLGA6L19H0YKK7 550 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 SLC16A4O15374 487 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 GLRA2P23416 452 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 HOXC8P31273 242 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 PRCPP42785 496 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 GJA8P48165 433 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 NCKAP1LP55160 1127 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 POU5F1BQ06416 359 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 PTGISQ16647 500 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 MARCH8Q5T0T0 291 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 HS2ST1Q7LGA3 356 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 ZNF720Q7Z2F6 126 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 ZNF410Q86VK4 478 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 ADSSL1Q8N142 457 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 CCDC155Q8N6L0 562 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 RNF149Q8NC42 400 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 KIAA0895Q8NCT3 520 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 GOLGA5Q8TBA6 731 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 ASAP3Q8TDY4 903 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 NLRP7Q8WX94 980 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 HPS3Q969F9 1004 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 NLRP4Q96MN2 994 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 ACCSQ96QU6 501 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 BPIFA3Q9BQP9 254 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 NTPCRQ9BSD7 190 aaKnown RBP11.95□□□□□ -0.5
PFDN1-204ENST00000512707 POLD4Q9HCU8 107 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms