RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 TCF25Q9BQ70 676 aa16.51■□□□□ 0.23
CCHCR1-229ENST00000512418 JPH2Q9BR39 696 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-229ENST00000512418 SH2D3AQ9BRG2 576 aa16.51■□□□□ 0.23
CCHCR1-229ENST00000512418 MRPL9Q9BYD2 267 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-229ENST00000512418 KCNMB3Q9NPA1 279 aa16.51■□□□□ 0.23
CCHCR1-229ENST00000512418 NGRNQ9NPE2 291 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-229ENST00000512418 CHST12Q9NRB3 414 aa16.51■□□□□ 0.23
CCHCR1-229ENST00000512418 A0A087WZ62 844 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 DDX11L8A8MPP1 907 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 PFKFB2O60825 505 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 DKC1O60832 514 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 MAFO75444 373 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 CSDE1O75534 798 aaKnown RBP16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 NEFLP07196 543 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 SRGAP2BP0DMP2 458 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 ATF7P17544 494 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 PBX3P40426 434 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 QARSP47897 775 aaKnown RBP16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 KRT17Q04695 432 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 HERC4Q5GLZ8 1057 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 PLPP4Q5VZY2 271 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 ANO5Q75V66 913 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 RHPN2Q8IUC4 686 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 NAP1L4Q99733 375 aaKnown RBP16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 FDXACB1Q9BRP7 624 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 TRAIPQ9BWF2 469 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 INO80BQ9C086 356 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 ENTPD7Q9NQZ7 604 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 SPG21Q9NZD8 308 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 SUCLA2Q9P2R7 463 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 MUTYHQ9UIF7 546 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 VAV3Q9UKW4 847 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 TPCN1Q9ULQ1 816 aa16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 USP15Q9Y4E8 981 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-229ENST00000512418 EML1O00423 815 aa16.49■□□□□ 0.23
CCHCR1-229ENST00000512418 TBX3O15119 743 aa16.49■□□□□ 0.23
CCHCR1-229ENST00000512418 ANAPC15P60006 121 aa16.49■□□□□ 0.23
CCHCR1-229ENST00000512418 PLA2G4FQ68DD2 849 aa16.49■□□□□ 0.23
CCHCR1-229ENST00000512418 TMEM184AQ6ZMB5 413 aa16.49■□□□□ 0.23
CCHCR1-229ENST00000512418 VN1R2Q8NFZ6 395 aa16.49■□□□□ 0.23
CCHCR1-229ENST00000512418 HELQQ8TDG4 1101 aa16.49■□□□□ 0.23
CCHCR1-229ENST00000512418 SLC7A3Q8WY07 619 aa16.49■□□□□ 0.23
CCHCR1-229ENST00000512418 NLRP4Q96MN2 994 aa16.49■□□□□ 0.23
CCHCR1-229ENST00000512418 CYP26B1Q9NR63 512 aa16.49■□□□□ 0.23
CCHCR1-229ENST00000512418 CCNT1O60563 726 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 P4HBP07237 508 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 SKIP12755 728 aa16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 PHKA2P46019 1235 aa16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 RBM10P98175 930 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 KCNC3Q14003 757 aa16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 TWF2Q6IBS0 349 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 PIK3AP1Q6ZUJ8 805 aa16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 EXOC8Q8IYI6 725 aa16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 SLC39A11Q8N1S5 342 aa16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 WASF1Q92558 559 aa16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 PHF7Q9BWX1 381 aaPredicted RBP16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 PIN4Q9Y237 131 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 PPME1Q9Y570 386 aa16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 TRIOO75962 3097 aa16.48■□□□□ 0.23
CCHCR1-229ENST00000512418 HIDE1A8MVS5 230 aa16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 LOC730098B7Z3J9 87 aa16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 ALDH7A1P49419 539 aaKnown RBP16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 CBX2Q14781 532 aaPredicted RBP16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 CATSPER4Q7RTX7 472 aa16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 TMC7Q7Z402 723 aa16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 KSR1Q8IVT5 923 aa16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 OXER1Q8TDS5 423 aa16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 SUSD6Q92537 303 aa16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 HAS1Q92839 578 aa16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 CEP170P1Q96L14 293 aa16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 GJB4Q9NTQ9 266 aa16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 FAM105AQ9NUU6 356 aa16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 ORC3Q9UBD5 711 aaPredicted RBP16.47■□□□□ 0.23
CCHCR1-229ENST00000512418 CARNS1A5YM72 827 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 MARCH6O60337 910 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 CTDNEP1O95476 244 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 RFC5P40937 340 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 RAB27AP51159 221 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 POLGP54098 1239 aaPredicted RBP16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 NPEPPSP55786 919 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 BCAR1P56945 870 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 SMC1AQ14683 1233 aaKnown RBP16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 EPHA7Q15375 998 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 ANKRD54Q6NXT1 300 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 GLB1LQ6UWU2 654 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 POTEDQ86YR6 584 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 C4orf19Q8IY42 314 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 PSPC1Q8WXF1 523 aaKnown RBP16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 TMEM169Q96HH4 297 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 LXNQ9BS40 222 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 DHX33Q9H6R0 707 aaKnown RBP16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 IFT122Q9HBG6 1241 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 WRAP73Q9P2S5 460 aaPredicted RBP16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 COL4A3BPQ9Y5P4 624 aa16.46■□□□□ 0.23
CCHCR1-229ENST00000512418 MUC6Q6W4X9 2439 aa16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 GAS2O43903 313 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 ZNF623O75123 536 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms