RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ZFP91Q96JP5 570 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 MBOAT7Q96N66 472 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 IWS1Q96ST2 819 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 GOLPH3LQ9H4A5 285 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 POMKQ9H5K3 350 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 LIMD1Q9UGP4 676 aa11.75□□□□□ -0.53
PDLIM5-217ENST00000512274 LOXHD1Q8IVV2 1947 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 CYP3A7-CYP3A51PA0A087WV96 503 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 SLC26A4O43511 780 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 KINO60870 393 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 CAND2O75155 1236 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 NR3C2P08235 984 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 WEE2P0C1S8 567 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 HOXD8P13378 290 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 CYP3A7P24462 503 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 HOXC8P31273 242 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 LONP1P36776 959 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 USP11P51784 963 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 ERVFC1P60507 584 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 CEBPZQ03701 1054 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 LPIN1Q14693 890 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 FAM26DQ5JW98 314 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 CELF3Q5SZQ8 465 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 CMTR2Q8IYT2 770 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 DTWD2Q8NBA8 298 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 RIN2Q8WYP3 895 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 AK8Q96MA6 479 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 GZF1Q9H116 711 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 BCAS3Q9H6U6 928 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 PSTPIP2Q9H939 334 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 MLXIPQ9HAP2 919 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 PCDHA1Q9Y5I3 950 aa11.74□□□□□ -0.53
PDLIM5-217ENST00000512274 SYCE3A1L190 88 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 FAM205CA6NFA0 338 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 STK25O00506 426 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 MEIS2O14770 477 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 EIF3JO75822 258 aaKnown RBP11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 ABCB11O95342 1321 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 LGALS2P05162 132 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 SRGAP2BP0DMP2 458 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 PFKFB1P16118 471 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 NPR3P17342 541 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 AOC1P19801 751 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 ARHGAP4P98171 946 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 SP2Q02086 613 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 PTGDRQ13258 359 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 SEMA3FQ13275 785 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 PLPP4Q5VZY2 271 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 RTN4RL1Q86UN2 441 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 GAS2L3Q86XJ1 694 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 LINC01599Q8WXQ3 324 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 TNMDQ9H2S6 317 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 EHMT1Q9H9B1 1298 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 FAM13BQ9NYF5 915 aa11.73□□□□□ -0.53
PDLIM5-217ENST00000512274 ZNF202O95125 648 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 CYP3A4P08684 503 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 CCDC192P0DO97 292 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 GNAT1P11488 350 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 MARCKSP29966 332 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 CIITAP33076 1130 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 SYKP43405 635 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 NDUFA8P51970 172 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 UVSSAQ2YD98 709 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 KANK3Q6NY19 840 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 RUFY4Q6ZNE9 571 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 CCDC34Q96HJ3 373 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 CDCA3Q99618 268 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 SEMA4AQ9H3S1 761 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 PXMP2Q9NR77 195 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 TMEM260Q9NX78 707 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 KCNH3Q9ULD8 1083 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 MRPL11Q9Y3B7 192 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 CACNA1GO43497 2377 aa11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 KMT2BQ9UMN6 2715 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-217ENST00000512274 WNT7AO00755 349 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 OPLAHO14841 1288 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 ADAMTS3O15072 1205 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 TBX3O15119 743 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 EDIL3O43854 480 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 FGF18O76093 207 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 CFBP00751 764 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 UBA1P22314 1058 aaKnown RBP11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 SREBF1P36956 1147 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 KCNC3Q14003 757 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 INF2Q27J81 1249 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 UTP14CQ5TAP6 766 aaKnown RBP11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 TMEM184AQ6ZMB5 413 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 TRIM50Q86XT4 487 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 THNSL1Q8IYQ7 743 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 TBCKQ8TEA7 893 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 LMBR1Q8WVP7 490 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 RUBCNQ92622 972 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 MTMR9Q96QG7 549 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 CCSER1Q9C0I3 900 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 TSPY26PQ9H489 355 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 GRPEL1Q9HAV7 217 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 HCSTQ9UBK5 93 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 HOOK1Q9UJC3 728 aaKnown RBP11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 TUBE1Q9UJT0 475 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 FBXL21Q9UKT6 434 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms