RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 ZC2HC1CQ53FD0 456 aaPredicted RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 NXNQ6DKJ4 435 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 OR6B2Q6IFH4 312 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 HAUS6Q7Z4H7 955 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 PDIK1LQ8N165 341 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 ANKRD36BP1Q96IX9 119 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 NLRP4Q96MN2 994 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 JMJD4Q9H9V9 463 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 DMGDHQ9UI17 866 aaKnown RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 DIS3Q9Y2L1 958 aaKnown RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 CAPN6Q9Y6Q1 641 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 FAM205AQ6ZU69 1335 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 KDM6AO15550 1401 aaPredicted RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 WDR64B1ANS9 1081 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 GOLGA8MH3BSY2 632 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 CYP26A1O43174 497 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 RAD51CO43502 376 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 CRCPO75575 148 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 BRAFP15056 766 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 CCND2P30279 289 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 SSTR3P32745 418 aaPredicted RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 SEC24CP53992 1094 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 TPD52P55327 224 aaPredicted RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 IRX4P78413 519 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 CDKAL1Q5VV42 579 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 PRR5LQ6MZQ0 368 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 TTI2Q6NXR4 508 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 C16orf86Q6ZW13 317 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 ERICH1Q86X53 443 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 PDCD7Q8N8D1 485 aaKnown RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 KCTD6Q8NC69 237 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 FAM81BQ96LP2 452 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 MIS12Q9H081 205 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 GINM1Q9NU53 330 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 MAD2L2Q9UI95 211 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 MAGED2Q9UNF1 606 aaPredicted RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 DIP2BQ9P265 1576 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 A0A087X0T9 212 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 A6NJR5 290 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 SLC37A4O43826 429 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 FAM228BP0C875 321 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 IFRD2Q12894 506 aaPredicted RBP8.63□□□□□ -1.03
NEK1-208ENST00000512193 TAF12Q16514 161 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 LMBRD2Q68DH5 695 aaPredicted RBP8.63□□□□□ -1.03
NEK1-208ENST00000512193 RINT1Q6NUQ1 792 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 HNRNPLLQ8WVV9 542 aaKnown RBP8.63□□□□□ -1.03
NEK1-208ENST00000512193 ANKS1AQ92625 1134 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 ZNF668Q96K58 619 aaPredicted RBP8.63□□□□□ -1.03
NEK1-208ENST00000512193 ZIM3Q96PE6 472 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 NGRNQ9NPE2 291 aaKnown RBP8.63□□□□□ -1.03
NEK1-208ENST00000512193 AKT3Q9Y243 479 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 SALL1Q9NSC2 1324 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 SMIM22K7EJ46 135 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 PLS3P13797 630 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 CHRNA3P32297 505 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 CDO1Q16878 200 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 CENPUQ71F23 418 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 CCNYQ8ND76 341 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 HVCN1Q96D96 273 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 MED10Q9BTT4 135 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 FRMPD1Q5SYB0 1578 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 A0A087X0B3 334 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 TCRBV5S4A2TA0A5A2 114 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 CHUKO15111 745 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 FGFR4P22455 802 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 MRPS9P82933 396 aaKnown RBP8.63□□□□□ -1.03
NEK1-208ENST00000512193 KCTD2Q14681 263 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 KRT39Q6A163 491 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.63□□□□□ -1.03
NEK1-208ENST00000512193 SLC35G2Q8TBE7 412 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 CCT6BQ92526 530 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 GBP5Q96PP8 586 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 CCT8L2Q96SF2 557 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 ADAM33Q9BZ11 813 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 KBTBD4Q9NVX7 518 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 GABBR1Q9UBS5 961 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 CHORDC1Q9UHD1 332 aaPredicted RBP8.63□□□□□ -1.03
NEK1-208ENST00000512193 PPLO60437 1756 aa8.63□□□□□ -1.03
NEK1-208ENST00000512193 LRRIQ3A6PVS8 624 aaPredicted RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 MDH1P40925 334 aaKnown RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 PMS1P54277 932 aaKnown RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 SPP2Q13103 211 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 CCDC93Q567U6 631 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 INTS5Q6P9B9 1019 aaKnown RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 LDHDQ86WU2 507 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 FBXL16Q8N461 479 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 MCPH1Q8NEM0 835 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 SLC30A5Q8TAD4 765 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 AGPAT1Q99943 283 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 CELF4Q9BZC1 486 aaKnown RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 ARHGEF28Q8N1W1 1705 aaKnown RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 PREX1Q8TCU6 1659 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 H0Y3Z8 333 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 H3BQF6 201 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 EIF3HO15372 352 aaKnown RBP eCLIP8.62□□□□□ -1.03
NEK1-208ENST00000512193 CPP00450 1065 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 PSMA2P25787 234 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 FMO5P49326 533 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 GRB10Q13322 594 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 TFDP1Q14186 410 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms