RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 DUX4L4P0CJ87 422 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 DUX4L5P0CJ88 424 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 DUX4L6P0CJ89 424 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 DUX4L7P0CJ90 424 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 GYS1P13807 737 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 CIAPIN1Q6FI81 312 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 RTKN2Q8IZC4 609 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 WDR24Q96S15 920 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 FAM217BQ9NTX9 383 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-209ENST00000512055 DUX4Q9UBX2 424 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 MAD2L2Q9UI95 211 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 TMA7Q9Y2S6 64 aaKnown RBP11.62□□□□□ -0.55
CPNE4-209ENST00000512055 PCDHA13Q9Y5I0 950 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 KRIT1O00522 736 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 SRGAP2O75044 1071 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 GFPT2O94808 682 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 GAP43P17677 238 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 LIG4P49917 911 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 MYL7Q01449 175 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 DMP1Q13316 513 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-209ENST00000512055 HIPK4Q8NE63 616 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 ECE1P42892 770 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 EN1Q05925 392 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-209ENST00000512055 C2orf54Q08AI8 447 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 GLE1Q53GS7 698 aaKnown RBP11.62□□□□□ -0.55
CPNE4-209ENST00000512055 POMGNT1Q8WZA1 660 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 CCSER1Q9C0I3 900 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 SPATA31A6Q5VVP1 1343 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 LRRIQ4A6NIV6 560 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 RASSF10A6NK89 507 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 ZBTB22O15209 634 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 KRT19P08727 400 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 ZC3H12BQ5HYM0 836 aaKnown RBP11.62□□□□□ -0.55
CPNE4-209ENST00000512055 GADL1Q6ZQY3 521 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 SCAF8Q9UPN6 1271 aaKnown RBP11.62□□□□□ -0.55
CPNE4-209ENST00000512055 SALL1Q9NSC2 1324 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 PVALEFA0A1B0GWK0 134 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 ASNSP08243 561 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 CD19P15391 556 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 STK4Q13043 487 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 NCAPG2Q86XI2 1143 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 PALM2Q8IXS6 379 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 CCHCR1Q8TD31 782 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 ASCC2Q9H1I8 757 aaPredicted RBP11.61□□□□□ -0.55
CPNE4-209ENST00000512055 CARD9Q9H257 536 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 MLXIPQ9HAP2 919 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 HPSEQ9Y251 543 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 ATP11BQ9Y2G3 1177 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 A0A1B0GTH6 734 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 ARHGAP10A1A4S6 786 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 HNRNPDLO14979 420 aaKnown RBP11.61□□□□□ -0.55
CPNE4-209ENST00000512055 MYO1EQ12965 1108 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 EARS2Q5JPH6 523 aaKnown RBP11.61□□□□□ -0.55
CPNE4-209ENST00000512055 FBXL16Q8N461 479 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 RAPGEF5Q92565 580 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 IL17RAQ96F46 866 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 SEPT9Q9UHD8 586 aaPredicted RBP11.61□□□□□ -0.55
CPNE4-209ENST00000512055 CAPN1P07384 714 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 FXR1P51114 621 aaKnown RBP eCLIP11.61□□□□□ -0.55
CPNE4-209ENST00000512055 PKN1Q16512 942 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 ASZ1Q8WWH4 475 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 DPH5Q9H2P9 285 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 CHCHD3Q9NX63 227 aaKnown RBP11.61□□□□□ -0.55
CPNE4-209ENST00000512055 SYCE1LA8MT33 242 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 PPP4CP60510 307 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 STX1BP61266 288 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 GUCY2DQ02846 1103 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 RASGRP2Q7LDG7 609 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 NLRP9Q7RTR0 991 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 KRT12Q99456 494 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 PARP2Q9UGN5 583 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 RIC1Q4ADV7 1423 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 NPHP3-ACAD11A0A0J9YXS1 232 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 LRRC53A6NM62 1247 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 POLGP54098 1239 aaPredicted RBP11.61□□□□□ -0.55
CPNE4-209ENST00000512055 ADCY1Q08828 1119 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 LLGL1Q15334 1064 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 ARHGAP18Q8N392 663 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 METTL13Q8N6R0 699 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 RNF169Q8NCN4 708 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 ATP6V0A1Q93050 837 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 CHP1Q99653 195 aa11.61□□□□□ -0.55
CPNE4-209ENST00000512055 ADD3Q9UEY8 706 aaKnown RBP11.61□□□□□ -0.55
CPNE4-209ENST00000512055 RNASELQ05823 741 aaKnown RBP11.6□□□□□ -0.55
CPNE4-209ENST00000512055 KCNA1Q09470 495 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 LIN9Q5TKA1 542 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 PPP1R18Q6NYC8 613 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 FAM160B2Q86V87 743 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 ADSSL1Q8N142 457 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 SUGT1Q9Y2Z0 365 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 LTN1O94822 1766 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 KIF1AQ12756 1690 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 EIF3CLB5ME19 914 aaKnown RBP11.6□□□□□ -0.55
CPNE4-209ENST00000512055 ZBTB7AO95365 584 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 NR1I3Q14994 352 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 PROCA1Q8NCQ7 364 aaPredicted RBP11.6□□□□□ -0.55
CPNE4-209ENST00000512055 CEP170P1Q96L14 293 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 EIF3CQ99613 913 aaKnown RBP11.6□□□□□ -0.55
CPNE4-209ENST00000512055 RAVER2Q9HCJ3 691 aaKnown RBP11.6□□□□□ -0.55
CPNE4-209ENST00000512055 LMNB1P20700 586 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms