RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 DDX11Q96FC9 970 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 TSEN34Q9BSV6 310 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 NCOA5Q9HCD5 579 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 MAGEC2Q9UBF1 373 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 LRRC42Q9Y546 428 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 IRAK3Q9Y616 596 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 THADAQ6YHU6 1953 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 MEGF8Q7Z7M0 2845 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ANKRD12Q6UB98 2062 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 TCRBV7S2A1N4TA0A589 114 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 MYO1FO00160 1098 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 UPK1AO00322 258 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CLGNO14967 610 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 PMM2O15305 246 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 PRPF3O43395 683 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 PRC1O43663 620 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 MYO1BO43795 1136 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CNMDO75829 334 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 GOT2P00505 430 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CEBPBP17676 345 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 IL4RP24394 825 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 DNAJC21Q5F1R6 531 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 HERC4Q5GLZ8 1057 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 OLFML2BQ68BL8 750 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ALKBH5Q6P6C2 394 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CREBRFQ8IUR6 639 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CYP4X1Q8N118 509 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 METTL25Q8N6Q8 603 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ENDOVQ8N8Q3 282 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SEPT8Q92599 483 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 LTV1Q96GA3 475 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SGSM3Q96HU1 749 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 NEUROD6Q96NK8 337 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ERGIC2Q96RQ1 377 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 FZD8Q9H461 694 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 VIPAS39Q9H9C1 493 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CD248Q9HCU0 757 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 BSDC1Q9NW68 430 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 DACT1Q9NYF0 836 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CGNQ9P2M7 1197 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 MAD2L2Q9UI95 211 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNF510Q9Y2H8 683 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 PCDHGA4Q9Y5G9 962 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ANKRD62A6NC57 917 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 H0YHG0 523 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 TLL1O43897 1013 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 RNF40O75150 1001 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 USP2O75604 605 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 MTA2O94776 668 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 CMA1P23946 247 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 DPP6P42658 865 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 NSUN2Q08J23 767 aaKnown RBP eCLIP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 HNRNPDQ14103 355 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCDC6Q16204 474 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 FLYWCH1Q4VC44 716 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PRPF40BQ6NWY9 871 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PMF1Q6P1K2 205 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 GBP6Q6ZN66 633 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 NOP9Q86U38 636 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 DHX37Q8IY37 1157 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 CPNE9Q8IYJ1 553 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PROCA1Q8NCQ7 364 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PPFIBP2Q8ND30 876 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 CXCL16Q9H2A7 254 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 TNKS2Q9H2K2 1166 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZFYVE1Q9HBF4 777 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 TRPV5Q9NQA5 729 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 AGPAT5Q9NUQ2 364 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZSWIM5Q9P217 1185 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PCDHA5Q9Y5H7 936 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PMF1-BGLAPU3KQ54 211 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 YLPM1P49750 1951 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 TMX2-CTNND1H3BSU7 103 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 ERC2O15083 957 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 IPO8O15397 1037 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 TCEA3O75764 348 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 RSL1D1O76021 490 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 FERP16591 822 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 IFNAR1P17181 557 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 NLRP6P59044 892 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PTK7Q13308 1070 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 RASGRF1Q13972 1273 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 OLFM4Q6UX06 510 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PHLDB2Q86SQ0 1253 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 STAG1Q8WVM7 1258 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 NLRP7Q8WX94 980 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 ISL2Q96A47 359 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 LLPHQ9BRT6 129 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 STK31Q9BXU1 1019 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 HMG20BQ9P0W2 317 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 NKX1-2Q9UD57 310 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 FBXL5Q9UKA1 691 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 WWC3Q9ULE0 1092 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 MED16Q9Y2X0 877 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 NAALAD2Q9Y3Q0 740 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PCDHB6Q9Y5E3 794 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 DYSFO75923 2080 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 GOLGA6L10A0A0M3HER8 536 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 A6NNZ2 444 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms