RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 TGS1Q96RS0 853 aaKnown RBP13.87□□□□□ -0.19
PTCD2-209ENST00000511752 POLR3FQ9H1D9 316 aaPredicted RBP13.87□□□□□ -0.19
PTCD2-209ENST00000511752 BHMT2Q9H2M3 363 aa13.87□□□□□ -0.19
PTCD2-209ENST00000511752 PRDM12Q9H4Q4 367 aa13.87□□□□□ -0.19
PTCD2-209ENST00000511752 IFT122Q9HBG6 1241 aa13.87□□□□□ -0.19
PTCD2-209ENST00000511752 CHST12Q9NRB3 414 aa13.87□□□□□ -0.19
PTCD2-209ENST00000511752 DACT1Q9NYF0 836 aa13.87□□□□□ -0.19
PTCD2-209ENST00000511752 DNM3Q9UQ16 869 aa13.87□□□□□ -0.19
PTCD2-209ENST00000511752 PCDHB7Q9Y5E2 793 aa13.87□□□□□ -0.19
PTCD2-209ENST00000511752 CLIC4Q9Y696 253 aa13.87□□□□□ -0.19
PTCD2-209ENST00000511752 C9IYK1 514 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 SLC26A4O43511 780 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 CSDE1O75534 798 aaKnown RBP13.86□□□□□ -0.19
PTCD2-209ENST00000511752 EYA4O95677 639 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 FOSL2P15408 326 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 IBSPP21815 317 aaPredicted RBP13.86□□□□□ -0.19
PTCD2-209ENST00000511752 FGFR4P22455 802 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 ARL2P36404 184 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 LONP1P36776 959 aaKnown RBP13.86□□□□□ -0.19
PTCD2-209ENST00000511752 POU5F1BQ06416 359 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 ZRSR1Q15695 479 aaKnown RBP13.86□□□□□ -0.19
PTCD2-209ENST00000511752 FAM173BQ6P4H8 233 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 MAEAQ7L5Y9 396 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 MMTAG2Q9BU76 263 aaKnown RBP13.86□□□□□ -0.19
PTCD2-209ENST00000511752 CERS4Q9HA82 394 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 NLRC5Q86WI3 1866 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 ADGRA3Q8IWK6 1321 aa13.86□□□□□ -0.19
PTCD2-209ENST00000511752 RALGAPA2Q2PPJ7 1873 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 E9PMD0 336 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 DGKIO75912 1065 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 ARHGEF15O94989 841 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 CYP11B2P19099 503 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 UBA7P41226 1012 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 ERVK-21P61565 698 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 CEBPZQ03701 1054 aaKnown RBP13.85□□□□□ -0.19
PTCD2-209ENST00000511752 BTG3Q14201 252 aaPredicted RBP13.85□□□□□ -0.19
PTCD2-209ENST00000511752 BECN1Q14457 450 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 PTPAQ15257 358 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 PCBP1Q15365 356 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTCD2-209ENST00000511752 HYIQ5T013 277 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 FAM102BQ5T8I3 360 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 CABP7Q86V35 215 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 CRIPAKQ8N1N5 446 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 FIBCD1Q8N539 461 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 ARNTL2Q8WYA1 636 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
PTCD2-209ENST00000511752 CALML4Q96GE6 196 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 ZNF396Q96N95 335 aaPredicted RBP13.85□□□□□ -0.19
PTCD2-209ENST00000511752 SAMD11Q96NU1 681 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 ELAC1Q9H777 363 aaKnown RBP13.85□□□□□ -0.19
PTCD2-209ENST00000511752 TMEM161AQ9NX61 479 aa13.85□□□□□ -0.19
PTCD2-209ENST00000511752 PIN4Q9Y237 131 aaKnown RBP13.85□□□□□ -0.19
PTCD2-209ENST00000511752 LAMA3Q16787 3333 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 LRRIQ4A6NIV6 560 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 INO80B-WBP1J3KQ70 363 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 HOXA2O43364 376 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 ERLIN2O94905 339 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 ZSCAN22P10073 491 aaPredicted RBP13.84□□□□□ -0.19
PTCD2-209ENST00000511752 SKIP12755 728 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 GLRA2P23416 452 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 MARCKSP29966 332 aaPredicted RBP13.84□□□□□ -0.19
PTCD2-209ENST00000511752 PTENP60484 403 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 FAM189BP81408 668 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 NCBP1Q09161 790 aaKnown RBP13.84□□□□□ -0.19
PTCD2-209ENST00000511752 CAPSQ13938 189 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 PPP2R5AQ15172 486 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 TWF2Q6IBS0 349 aaKnown RBP13.84□□□□□ -0.19
PTCD2-209ENST00000511752 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
PTCD2-209ENST00000511752 CMTR2Q8IYT2 770 aaKnown RBP13.84□□□□□ -0.19
PTCD2-209ENST00000511752 RASSF8Q8NHQ8 419 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 ASAP3Q8TDY4 903 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 USP28Q96RU2 1077 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 RC3H2Q9HBD1 1191 aaKnown RBP13.84□□□□□ -0.19
PTCD2-209ENST00000511752 GPRC5CQ9NQ84 441 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 AGPAT5Q9NUQ2 364 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 MTUS1Q9ULD2 1270 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 RWDD3Q9Y3V2 267 aa13.84□□□□□ -0.19
PTCD2-209ENST00000511752 COL4A4P53420 1690 aaPredicted RBP13.83□□□□□ -0.2
PTCD2-209ENST00000511752 A0A0U1RQF3 1178 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 F13A1P00488 732 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 RAB27AP51159 221 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 GRB10Q13322 594 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 FOXD4L5Q5VV16 416 aaPredicted RBP13.83□□□□□ -0.2
PTCD2-209ENST00000511752 ECHDC2Q86YB7 292 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 ZBTB8OSQ8IWT0 167 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 FBXO22Q8NEZ5 403 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 FOXD4L4Q8WXT5 416 aaPredicted RBP13.83□□□□□ -0.2
PTCD2-209ENST00000511752 KIFAP3Q92845 792 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 IFT74Q96LB3 600 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 PNMA5Q96PV4 448 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 PLIN2Q99541 437 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 TRAIPQ9BWF2 469 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 NFKBIZQ9BYH8 718 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 MINDY3Q9H8M7 445 aa13.83□□□□□ -0.2
PTCD2-209ENST00000511752 MORC2Q9Y6X9 1032 aaPredicted RBP13.83□□□□□ -0.2
PTCD2-209ENST00000511752 FNDC1Q4ZHG4 1894 aaPredicted RBP13.82□□□□□ -0.2
PTCD2-209ENST00000511752 GTPBP6O43824 516 aaPredicted RBP13.82□□□□□ -0.2
PTCD2-209ENST00000511752 EOMESO95936 686 aa13.82□□□□□ -0.2
PTCD2-209ENST00000511752 SSBP05455 408 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTCD2-209ENST00000511752 IGFBP4P22692 258 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms