RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 MAEAQ7L5Y9 396 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 SRGAP1Q7Z6B7 1085 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 GPBP1Q86WP2 473 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 KSR1Q8IVT5 923 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 RNF149Q8NC42 400 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 CHAMP1Q96JM3 812 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 IFT74Q96LB3 600 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 FDXACB1Q9BRP7 624 aaPredicted RBP14.25□□□□□ -0.13
COL6A6-203ENST00000511332 RUSC1Q9BVN2 902 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 NFKBIZQ9BYH8 718 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 CUEDC2Q9H467 287 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 AGO3Q9H9G7 860 aaKnown RBP14.25□□□□□ -0.13
COL6A6-203ENST00000511332 CDHR5Q9HBB8 845 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 GPRC5CQ9NQ84 441 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 PADI3Q9ULW8 664 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 NOC2LQ9Y3T9 749 aaKnown RBP14.25□□□□□ -0.13
COL6A6-203ENST00000511332 LRRIQ4A6NIV6 560 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 HIP1RO75146 1068 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 KRT18P05783 430 aaKnown RBP14.24□□□□□ -0.13
COL6A6-203ENST00000511332 SRGAP2CP0DJJ0 459 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 GLRA2P23416 452 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 NAMPTP43490 491 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 WDR5P61964 334 aaKnown RBP14.24□□□□□ -0.13
COL6A6-203ENST00000511332 NFX1Q12986 1120 aaKnown RBP14.24□□□□□ -0.13
COL6A6-203ENST00000511332 DMP1Q13316 513 aaPredicted RBP14.24□□□□□ -0.13
COL6A6-203ENST00000511332 MCM6Q14566 821 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 PCBP1Q15365 356 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL6A6-203ENST00000511332 FAM228AQ86W67 206 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 PDILTQ8N807 584 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 ASAP3Q8TDY4 903 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 ZNF668Q96K58 619 aaPredicted RBP14.24□□□□□ -0.13
COL6A6-203ENST00000511332 SLC9A7Q96T83 725 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 OSBPL7Q9BZF2 842 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 C2orf40Q9H1Z8 148 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 C17orf75Q9HAS0 396 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 MAGEF1Q9HAY2 307 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 IFT122Q9HBG6 1241 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 ERVK-5Q9HDB9 667 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 ODF2LQ9ULJ1 636 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 SLC4A7Q9Y6M7 1214 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 TTC3P53804 2025 aa14.24□□□□□ -0.13
COL6A6-203ENST00000511332 PHLPP2Q6ZVD8 1323 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 ERLIN2O94905 339 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 AMHP03971 560 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 CMA1P23946 247 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 PTENP60484 403 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 DHX8Q14562 1220 aaKnown RBP14.23□□□□□ -0.13
COL6A6-203ENST00000511332 NAALADL2Q58DX5 795 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 CDCA2Q69YH5 1023 aaPredicted RBP14.23□□□□□ -0.13
COL6A6-203ENST00000511332 SV2BQ7L1I2 683 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 IFNLR1Q8IU57 520 aaPredicted RBP14.23□□□□□ -0.13
COL6A6-203ENST00000511332 ZBTB8OSQ8IWT0 167 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 IQUBQ8NA54 791 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 LRRC15Q8TF66 581 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 GDPD2Q9HCC8 539 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 KCNG1Q9UIX4 513 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 ST3GAL5Q9UNP4 418 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 NLRC5Q86WI3 1866 aa14.23□□□□□ -0.13
COL6A6-203ENST00000511332 TRIOBPQ9H2D6 2365 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 RANBP2P49792 3224 aaKnown RBP14.22□□□□□ -0.13
COL6A6-203ENST00000511332 A0A087X0B3 334 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 A0A1W2PQ27 194 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 A0A1W2PQ64 194 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 A0A1W2PQD8 194 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 DENND3A2RUS2 1198 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 GOLGA6L4A6NEF3 574 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 TBCAO75347 108 aaKnown RBP14.22□□□□□ -0.13
COL6A6-203ENST00000511332 ATP2A2P16615 1042 aaKnown RBP14.22□□□□□ -0.13
COL6A6-203ENST00000511332 RAD51AP2Q09MP3 1159 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 MAPK7Q13164 816 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
COL6A6-203ENST00000511332 E2F4Q16254 413 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 TCTN1Q2MV58 587 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 LRIT3Q3SXY7 679 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 CATSPER4Q7RTX7 472 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 DEPTORQ8TB45 409 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 PHOSPHO2Q8TCD6 241 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 DHX58Q96C10 678 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 REEP2Q9BRK0 252 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 LRRC27Q9C0I9 530 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 TNMDQ9H2S6 317 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 C1orf112Q9NSG2 853 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
COL6A6-203ENST00000511332 CXXC1Q9P0U4 656 aaPredicted RBP14.22□□□□□ -0.13
COL6A6-203ENST00000511332 LARSQ9P2J5 1176 aaKnown RBP14.22□□□□□ -0.13
COL6A6-203ENST00000511332 KCNH3Q9ULD8 1083 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 COL4A6Q14031 1691 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 RALGAPA2Q2PPJ7 1873 aa14.22□□□□□ -0.13
COL6A6-203ENST00000511332 FNDC1Q4ZHG4 1894 aaPredicted RBP14.21□□□□□ -0.13
COL6A6-203ENST00000511332 INO80B-WBP1J3KQ70 363 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 POLR2DO15514 142 aaKnown RBP14.21□□□□□ -0.13
COL6A6-203ENST00000511332 PFKFB1P16118 471 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 ZSCAN20P17040 1043 aaPredicted RBP14.21□□□□□ -0.13
COL6A6-203ENST00000511332 EFNA5P52803 228 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 MBTD1Q05BQ5 628 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 ARSHQ5FYA8 562 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 DAW1Q8N136 415 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 BSNDQ8WZ55 320 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 MRPS27Q92552 414 aaKnown RBP14.21□□□□□ -0.13
COL6A6-203ENST00000511332 PRIMPOLQ96LW4 560 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms