RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	NSUN3	Q9H649	340 aa	Known RBP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	UBE2Z	Q9H832	354 aa	Predicted RBP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	ATP6V0A4	Q9HBG4	840 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	TCF20	Q9UGU0	1960 aa	Known RBP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	ASAP2	O43150	1006 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	GAS2	O43903	313 aa	Known RBP	13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	ZNF623	O75123	536 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	ITGB1	P05556	798 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	U2AF2	P26368	475 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	1e-8	■■□□□ 13.8
CLDND1-223	ENST00000511081	TXK	P42681	527 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	KCNQ1	P51787	676 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	GUCY1B3	Q02153	619 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	CTTN	Q14247	550 aa	Known RBP	13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	LEXM	Q3ZCV2	418 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	KSR1	Q8IVT5	923 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	KLHL23	Q8NBE8	558 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	NEK9	Q8TD19	979 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	ADAMTS19	Q8TE59	1207 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	PRPF31	Q8WWY3	499 aa	Known RBP	13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	NLRP7	Q8WX94	980 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	SLC7A3	Q8WY07	619 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	CASD1	Q96PB1	797 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	TMEM117	Q9H0C3	514 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	CWH43	Q9H720	699 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	ANKEF1	Q9NU02	776 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	TYW1	Q9NV66	732 aa	Known RBP	13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	C5orf42	Q9H799	3197 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	KIAA1671	Q9BY89	1806 aa		13.57	□□□□□ -0.24
CLDND1-223	ENST00000511081	ATG2A	Q2TAZ0	1938 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	HOXA2	O43364	376 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	NCK2	O43639	380 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	CSDE1	O75534	798 aa	Known RBP	13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	SPATA31C1	P0DKV0	1188 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	ATF7	P17544	494 aa	Predicted RBP	13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	FGFR4	P22455	802 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	DNAJB1	P25685	340 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	TRAPPC10	P48553	1259 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	POU5F1B	Q06416	359 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	PAN2	Q504Q3	1202 aa	Known RBP	13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	TCEAL5	Q5H9L2	206 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	RHPN2	Q8IUC4	686 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	TPH2	Q8IWU9	490 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	C4orf32	Q8N8J7	132 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	PABPC5	Q96DU9	382 aa	Known RBP	13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	ALG13	Q9NP73	1137 aa	Known RBP	13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	XPNPEP1	Q9NQW7	623 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	DACT1	Q9NYF0	836 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	COL4A3BP	Q9Y5P4	624 aa		13.56	□□□□□ -0.24
CLDND1-223	ENST00000511081	TBKBP1	A7MCY6	615 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	TNFRSF10A	O00220	468 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	FGFR1	P11362	822 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	LTBR	P36941	435 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	FOSB	P53539	338 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	POLG	P54098	1239 aa	Predicted RBP	13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	CYP4A11	Q02928	519 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	UBE3A	Q05086	875 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	LAMTOR4	Q0VGL1	99 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	XKR9	Q5GH70	373 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	LRRC55	Q6ZSA7	311 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	SRGAP1	Q7Z6B7	1085 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	FERMT3	Q86UX7	667 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	NOSTRIN	Q8IVI9	506 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	TCP11	Q8WWU5	503 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	PSPC1	Q8WXF1	523 aa	Known RBP	13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	RSPH1	Q8WYR4	309 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	TMEM143	Q96AN5	459 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	PHF12	Q96QT6	1004 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	UHRF1	Q96T88	793 aa	Predicted RBP	13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	AAAS	Q9NRG9	546 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	PCDHB12	Q9Y5F1	795 aa		13.55	□□□□□ -0.24
CLDND1-223	ENST00000511081	SFPQ	P23246	707 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	HOXA11	P31270	313 aa	Predicted RBP	13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	MCM7	P33993	719 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	ARL2	P36404	184 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	PHKA2	P46019	1235 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	RARRES1	P49788	294 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	TOB1	P50616	345 aa	Predicted RBP	13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	PLCB3	Q01970	1234 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	HYAL1	Q12794	435 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	EMC2	Q15006	297 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	CSPP1	Q1MSJ5	1256 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	CLLU1OS	Q5K130	101 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	MRPL10	Q7Z7H8	261 aa	Known RBP	13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	CATSPER3	Q86XQ3	398 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	FAM184A	Q8NB25	1140 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	SCLT1	Q96NL6	688 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	MINDY3	Q9H8M7	445 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	TUFT1	Q9NNX1	390 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	ARID2	Q68CP9	1835 aa		13.54	□□□□□ -0.24
CLDND1-223	ENST00000511081	PLXNA4	Q9HCM2	1894 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	GRXCR2	A6NFK2	248 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	ST18	O60284	1047 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	DGAT1	O75907	488 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	SKI	P12755	728 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	ATP2B1	P20020	1258 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	MUT	P22033	750 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	RPA1	P27694	616 aa		13.53	□□□□□ -0.24

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