RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ZNF202O95125 648 aa9.8□□□□□ -0.84
USP53-206ENST00000510737 MSX2P35548 267 aaPredicted RBP9.8□□□□□ -0.84
USP53-206ENST00000510737 ABHD17CQ6PCB6 329 aa9.8□□□□□ -0.84
USP53-206ENST00000510737 C1orf210Q8IVY1 113 aa9.8□□□□□ -0.84
USP53-206ENST00000510737 DLG3Q92796 817 aa9.8□□□□□ -0.84
USP53-206ENST00000510737 GBP4Q96PP9 640 aa9.8□□□□□ -0.84
USP53-206ENST00000510737 TANGO6Q9C0B7 1094 aa9.8□□□□□ -0.84
USP53-206ENST00000510737 OR10A2Q9H208 303 aa9.8□□□□□ -0.84
USP53-206ENST00000510737 PLA2G3Q9NZ20 509 aa9.8□□□□□ -0.84
USP53-206ENST00000510737 B3GALT1Q9Y5Z6 326 aa9.8□□□□□ -0.84
USP53-206ENST00000510737 CDC42BPBQ9Y5S2 1711 aa9.79□□□□□ -0.84
USP53-206ENST00000510737 ACRV1P26436 265 aa9.79□□□□□ -0.84
USP53-206ENST00000510737 RPS19P39019 145 aaKnown RBP9.79□□□□□ -0.84
USP53-206ENST00000510737 CACTINQ8WUQ7 758 aaKnown RBP9.79□□□□□ -0.84
USP53-206ENST00000510737 CELF4Q9BZC1 486 aaKnown RBP9.79□□□□□ -0.84
USP53-206ENST00000510737 CSRNP2Q9H175 543 aa9.79□□□□□ -0.84
USP53-206ENST00000510737 KCNH7Q9NS40 1196 aa9.79□□□□□ -0.84
USP53-206ENST00000510737 ZC3H13Q5T200 1668 aaKnown RBP9.79□□□□□ -0.84
USP53-206ENST00000510737 SAMD9LQ8IVG5 1584 aa9.79□□□□□ -0.84
USP53-206ENST00000510737 SETBP1Q9Y6X0 1596 aa9.79□□□□□ -0.84
USP53-206ENST00000510737 A2MP01023 1474 aa9.79□□□□□ -0.84
USP53-206ENST00000510737 LRP6O75581 1613 aa9.78□□□□□ -0.84
USP53-206ENST00000510737 ROBO1Q9Y6N7 1651 aa9.78□□□□□ -0.84
USP53-206ENST00000510737 LSM12Q3MHD2 195 aaKnown RBP9.78□□□□□ -0.84
USP53-206ENST00000510737 CATSPEREQ5SY80 951 aa9.78□□□□□ -0.84
USP53-206ENST00000510737 ZNF772Q68DY9 489 aaPredicted RBP9.78□□□□□ -0.84
USP53-206ENST00000510737 FAM89AQ96GI7 184 aa9.78□□□□□ -0.84
USP53-206ENST00000510737 TLR9Q9NR96 1032 aa9.78□□□□□ -0.84
USP53-206ENST00000510737 PPP1R1BQ9UD71 204 aaPredicted RBP9.78□□□□□ -0.84
USP53-206ENST00000510737 MIA2Q96PC5 1412 aa9.78□□□□□ -0.84
USP53-206ENST00000510737 PREX2Q70Z35 1606 aa9.78□□□□□ -0.84
USP53-206ENST00000510737 FOXP2O15409 715 aa9.77□□□□□ -0.85
USP53-206ENST00000510737 ATP2B1P20020 1258 aa9.77□□□□□ -0.85
USP53-206ENST00000510737 TRIM61Q5EBN2 209 aa9.77□□□□□ -0.85
USP53-206ENST00000510737 FNDC7Q5VTL7 733 aa9.77□□□□□ -0.85
USP53-206ENST00000510737 GRAMD4Q6IC98 578 aa9.77□□□□□ -0.85
USP53-206ENST00000510737 DEPDC7Q96QD5 511 aa9.77□□□□□ -0.85
USP53-206ENST00000510737 SNTG2Q9NY99 539 aa9.77□□□□□ -0.85
USP53-206ENST00000510737 CDK12Q9NYV4 1490 aaPredicted RBP9.77□□□□□ -0.85
USP53-206ENST00000510737 FGD2Q7Z6J4 655 aa9.76□□□□□ -0.85
USP53-206ENST00000510737 RTKN2Q8IZC4 609 aa9.76□□□□□ -0.85
USP53-206ENST00000510737 CLIP1P30622 1438 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 GOLGA6L22H0YM25 854 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 SDHAP31040 664 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 MEOX1P50221 254 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 ABHD18Q0P651 414 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 SAFB2Q14151 953 aaKnown RBP eCLIP9.75□□□□□ -0.85
USP53-206ENST00000510737 GRM7Q14831 915 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 SPTY2D1Q68D10 685 aaPredicted RBP9.75□□□□□ -0.85
USP53-206ENST00000510737 HIPK4Q8NE63 616 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 FOXRED1Q96CU9 486 aaPredicted RBP9.75□□□□□ -0.85
USP53-206ENST00000510737 TMEM176AQ96HP8 235 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 ASB1Q9Y576 335 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 FAM135AQ9P2D6 1515 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 UGGT1Q9NYU2 1555 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 INO80Q9ULG1 1556 aaPredicted RBP9.75□□□□□ -0.85
USP53-206ENST00000510737 JCADQ9P266 1359 aa9.75□□□□□ -0.85
USP53-206ENST00000510737 ZBTB48P10074 688 aaPredicted RBP9.74□□□□□ -0.85
USP53-206ENST00000510737 GTF2F1P35269 517 aaKnown RBP eCLIP9.74□□□□□ -0.85
USP53-206ENST00000510737 STAT3P40763 770 aa9.74□□□□□ -0.85
USP53-206ENST00000510737 TMEM132BQ14DG7 1078 aa9.74□□□□□ -0.85
USP53-206ENST00000510737 ACAP1Q15027 740 aa9.74□□□□□ -0.85
USP53-206ENST00000510737 PLEKHG4BQ96PX9 1271 aa9.74□□□□□ -0.85
USP53-206ENST00000510737 DNAJC7Q99615 494 aa9.74□□□□□ -0.85
USP53-206ENST00000510737 FAM184BQ9ULE4 1060 aa9.74□□□□□ -0.85
USP53-206ENST00000510737 TCRBV16S1A1N1A0A5B0 115 aa9.73□□□□□ -0.85
USP53-206ENST00000510737 SLC26A4O43511 780 aa9.73□□□□□ -0.85
USP53-206ENST00000510737 EFCAB14O75071 495 aa9.73□□□□□ -0.85
USP53-206ENST00000510737 HIBADHP31937 336 aaKnown RBP9.73□□□□□ -0.85
USP53-206ENST00000510737 BRAPQ7Z569 592 aa9.73□□□□□ -0.85
USP53-206ENST00000510737 RTN4RL1Q86UN2 441 aaPredicted RBP9.73□□□□□ -0.85
USP53-206ENST00000510737 JMYQ8N9B5 988 aa9.73□□□□□ -0.85
USP53-206ENST00000510737 MAGEB10Q96LZ2 347 aaPredicted RBP9.73□□□□□ -0.85
USP53-206ENST00000510737 MSL2Q9HCI7 577 aa9.73□□□□□ -0.85
USP53-206ENST00000510737 PZPP20742 1482 aa9.72□□□□□ -0.85
USP53-206ENST00000510737 NLRP1Q9C000 1473 aa9.72□□□□□ -0.85
USP53-206ENST00000510737 ATP7AQ04656 1500 aa9.72□□□□□ -0.85
USP53-206ENST00000510737 COL16A1Q07092 1604 aaPredicted RBP9.72□□□□□ -0.85
USP53-206ENST00000510737 ADAM15Q13444 863 aa9.72□□□□□ -0.85
USP53-206ENST00000510737 MEX3CQ5U5Q3 659 aaKnown RBP9.72□□□□□ -0.85
USP53-206ENST00000510737 SHCBP1Q8NEM2 672 aa9.72□□□□□ -0.85
USP53-206ENST00000510737 WDR48Q8TAF3 677 aa9.72□□□□□ -0.85
USP53-206ENST00000510737 NELFAQ9H3P2 528 aa9.72□□□□□ -0.85
USP53-206ENST00000510737 CEP72Q9P209 647 aa9.72□□□□□ -0.85
USP53-206ENST00000510737 CTDP1Q9Y5B0 961 aaPredicted RBP9.72□□□□□ -0.85
USP53-206ENST00000510737 WASHC2CQ9Y4E1 1318 aa9.72□□□□□ -0.85
USP53-206ENST00000510737 TMEM94Q12767 1356 aa9.72□□□□□ -0.85
USP53-206ENST00000510737 MAP3K1Q13233 1512 aa9.72□□□□□ -0.85
USP53-206ENST00000510737 SLC12A8A0AV02 714 aa9.71□□□□□ -0.86
USP53-206ENST00000510737 KIF3BO15066 747 aa9.71□□□□□ -0.86
USP53-206ENST00000510737 TGFB2P61812 414 aa9.71□□□□□ -0.86
USP53-206ENST00000510737 RBL2Q08999 1139 aa9.71□□□□□ -0.86
USP53-206ENST00000510737 TMEM177Q53S58 311 aa9.71□□□□□ -0.86
USP53-206ENST00000510737 ZC3H12BQ5HYM0 836 aaKnown RBP9.71□□□□□ -0.86
USP53-206ENST00000510737 IGSF22Q8N9C0 903 aa9.71□□□□□ -0.86
USP53-206ENST00000510737 ERCC4Q92889 916 aaPredicted RBP9.71□□□□□ -0.86
USP53-206ENST00000510737 CHFRQ96EP1 664 aa9.71□□□□□ -0.86
USP53-206ENST00000510737 IKZF4Q9H2S9 585 aa9.71□□□□□ -0.86
USP53-206ENST00000510737 TRIM39Q9HCM9 518 aa9.71□□□□□ -0.86
USP53-206ENST00000510737 SFMBT1Q9UHJ3 866 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms