RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 IFT122Q9HBG6 1241 aa23.74■■□□□ 1.39
LIN54-208ENST00000509748 ARID2Q68CP9 1835 aa23.73■■□□□ 1.39
LIN54-208ENST00000509748 NEMFO60524 1076 aa23.73■■□□□ 1.39
LIN54-208ENST00000509748 LYPLA2O95372 231 aa23.73■■□□□ 1.39
LIN54-208ENST00000509748 IRS1P35568 1242 aa23.73■■□□□ 1.39
LIN54-208ENST00000509748 RFC5P40937 340 aa23.73■■□□□ 1.39
LIN54-208ENST00000509748 TPH2Q8IWU9 490 aa23.73■■□□□ 1.39
LIN54-208ENST00000509748 POF1BQ8WVV4 589 aa23.73■■□□□ 1.39
LIN54-208ENST00000509748 PRPF31Q8WWY3 499 aaKnown RBP23.73■■□□□ 1.39
LIN54-208ENST00000509748 TMEM143Q96AN5 459 aa23.73■■□□□ 1.39
LIN54-208ENST00000509748 C8orf76Q96K31 380 aa23.73■■□□□ 1.39
LIN54-208ENST00000509748 CHST12Q9NRB3 414 aa23.73■■□□□ 1.39
LIN54-208ENST00000509748 SH2B1Q9NRF2 756 aaPredicted RBP23.73■■□□□ 1.39
LIN54-208ENST00000509748 GTF2F1P35269 517 aaKnown RBP eCLIP23.72■■□□□ 1.395e-7■■■■■ 29.3
LIN54-208ENST00000509748 TXKP42681 527 aa23.72■■□□□ 1.39
LIN54-208ENST00000509748 CLLU1OSQ5K130 101 aa23.72■■□□□ 1.39
LIN54-208ENST00000509748 OTUD6AQ7L8S5 288 aa23.72■■□□□ 1.39
LIN54-208ENST00000509748 COLGALT1Q8NBJ5 622 aa23.72■■□□□ 1.39
LIN54-208ENST00000509748 FBXO18Q8NFZ0 1043 aa23.72■■□□□ 1.39
LIN54-208ENST00000509748 SLC7A3Q8WY07 619 aa23.72■■□□□ 1.39
LIN54-208ENST00000509748 TRAIPQ9BWF2 469 aa23.72■■□□□ 1.39
LIN54-208ENST00000509748 COL4A3BPQ9Y5P4 624 aa23.72■■□□□ 1.39
LIN54-208ENST00000509748 H3BQ06 376 aaPredicted RBP23.71■■□□□ 1.39
LIN54-208ENST00000509748 CSPG5O95196 566 aa23.71■■□□□ 1.39
LIN54-208ENST00000509748 EOMESO95936 686 aa23.71■■□□□ 1.39
LIN54-208ENST00000509748 POLGP54098 1239 aaPredicted RBP23.71■■□□□ 1.39
LIN54-208ENST00000509748 SAFBQ15424 915 aaKnown RBP eCLIP23.71■■□□□ 1.39
LIN54-208ENST00000509748 XKR9Q5GH70 373 aa23.71■■□□□ 1.39
LIN54-208ENST00000509748 EXOC8Q8IYI6 725 aa23.71■■□□□ 1.39
LIN54-208ENST00000509748 NLRP4Q96MN2 994 aa23.71■■□□□ 1.39
LIN54-208ENST00000509748 INO80BQ9C086 356 aaPredicted RBP23.71■■□□□ 1.39
LIN54-208ENST00000509748 XPNPEP1Q9NQW7 623 aa23.71■■□□□ 1.39
LIN54-208ENST00000509748 DACT1Q9NYF0 836 aa23.71■■□□□ 1.39
LIN54-208ENST00000509748 PCDHB12Q9Y5F1 795 aa23.71■■□□□ 1.39
LIN54-208ENST00000509748 HOXA2O43364 376 aa23.7■■□□□ 1.38
LIN54-208ENST00000509748 NCK2O43639 380 aa23.7■■□□□ 1.38
LIN54-208ENST00000509748 ATP2B1P20020 1258 aa23.7■■□□□ 1.38
LIN54-208ENST00000509748 SFPQP23246 707 aaKnown RBP eCLIP23.7■■□□□ 1.38
LIN54-208ENST00000509748 HMGN5P82970 282 aaKnown RBP23.7■■□□□ 1.38
LIN54-208ENST00000509748 LAMTOR4Q0VGL1 99 aa23.7■■□□□ 1.38
LIN54-208ENST00000509748 EMC2Q15006 297 aa23.7■■□□□ 1.38
LIN54-208ENST00000509748 ADGRD2Q7Z7M1 963 aa23.7■■□□□ 1.38
LIN54-208ENST00000509748 FOXP1Q9H334 677 aaPredicted RBP23.7■■□□□ 1.38
LIN54-208ENST00000509748 MINDY3Q9H8M7 445 aa23.7■■□□□ 1.38
LIN54-208ENST00000509748 AAASQ9NRG9 546 aa23.7■■□□□ 1.38
LIN54-208ENST00000509748 BMP2KQ9NSY1 1161 aaPredicted RBP23.7■■□□□ 1.38
LIN54-208ENST00000509748 CLDND1Q9NY35 253 aa23.7■■□□□ 1.38
LIN54-208ENST00000509748 GRXCR2A6NFK2 248 aa23.69■■□□□ 1.38
LIN54-208ENST00000509748 FGF18O76093 207 aa23.69■■□□□ 1.38
LIN54-208ENST00000509748 MCM7P33993 719 aa23.69■■□□□ 1.38
LIN54-208ENST00000509748 PHKA2P46019 1235 aa23.69■■□□□ 1.38
LIN54-208ENST00000509748 DLX2Q07687 328 aaPredicted RBP23.69■■□□□ 1.38
LIN54-208ENST00000509748 SPOUT1Q5T280 376 aaKnown RBP23.69■■□□□ 1.38
LIN54-208ENST00000509748 PTCRAQ6ISU1 281 aaPredicted RBP23.69■■□□□ 1.38
LIN54-208ENST00000509748 RNF169Q8NCN4 708 aa23.69■■□□□ 1.38
LIN54-208ENST00000509748 PSPC1Q8WXF1 523 aaKnown RBP23.69■■□□□ 1.38
LIN54-208ENST00000509748 CD320Q9NPF0 282 aa23.69■■□□□ 1.38
LIN54-208ENST00000509748 ANKEF1Q9NU02 776 aa23.69■■□□□ 1.38
LIN54-208ENST00000509748 PCDHGC5Q9Y5F6 944 aa23.69■■□□□ 1.38
LIN54-208ENST00000509748 POTEMA6NI47 508 aa23.68■■□□□ 1.38
LIN54-208ENST00000509748 GAS2O43903 313 aaKnown RBP23.68■■□□□ 1.38
LIN54-208ENST00000509748 SRGAP2CP0DJJ0 459 aa23.68■■□□□ 1.38
LIN54-208ENST00000509748 SPATA31C1P0DKV0 1188 aa23.68■■□□□ 1.38
LIN54-208ENST00000509748 IL9P15248 144 aa23.68■■□□□ 1.38
LIN54-208ENST00000509748 LAG3P18627 525 aa23.68■■□□□ 1.38
LIN54-208ENST00000509748 UBE3AQ05086 875 aa23.68■■□□□ 1.38
LIN54-208ENST00000509748 ADAM15Q13444 863 aa23.68■■□□□ 1.38
LIN54-208ENST00000509748 CATSPER4Q7RTX7 472 aa23.68■■□□□ 1.38
LIN54-208ENST00000509748 FERMT3Q86UX7 667 aa23.68■■□□□ 1.38
LIN54-208ENST00000509748 HELQQ8TDG4 1101 aa23.68■■□□□ 1.38
LIN54-208ENST00000509748 A0A087WWV3 80 aa23.67■■□□□ 1.38
LIN54-208ENST00000509748 LINC01565O15544 149 aa23.67■■□□□ 1.38
LIN54-208ENST00000509748 ZNF623O75123 536 aa23.67■■□□□ 1.38
LIN54-208ENST00000509748 HOXA11P31270 313 aaPredicted RBP23.67■■□□□ 1.38
LIN54-208ENST00000509748 ERVFC1P60507 584 aa23.67■■□□□ 1.38
LIN54-208ENST00000509748 RABEP1Q15276 862 aa23.67■■□□□ 1.38
LIN54-208ENST00000509748 ZNF174Q15697 407 aa23.67■■□□□ 1.38
LIN54-208ENST00000509748 SRGAP1Q7Z6B7 1085 aa23.67■■□□□ 1.38
LIN54-208ENST00000509748 FAM178BQ8IXR5 827 aa23.67■■□□□ 1.38
LIN54-208ENST00000509748 TCP11Q8WWU5 503 aa23.67■■□□□ 1.38
LIN54-208ENST00000509748 IGFLR1Q9H665 355 aa23.67■■□□□ 1.38
LIN54-208ENST00000509748 PIN4Q9Y237 131 aaKnown RBP23.67■■□□□ 1.38
LIN54-208ENST00000509748 MEIS3P2A8K0S8 358 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 FSCN2O14926 492 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 ASAP2O43150 1006 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 TBX10O75333 385 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 PLCB3Q01970 1234 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 CSPP1Q1MSJ5 1256 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 PUS10Q3MIT2 529 aaKnown RBP23.66■■□□□ 1.38
LIN54-208ENST00000509748 TWF2Q6IBS0 349 aaKnown RBP23.66■■□□□ 1.38
LIN54-208ENST00000509748 KCNT2Q6UVM3 1135 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 EP400NLQ6ZTU2 488 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 THNSL1Q8IYQ7 743 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 ABI1Q8IZP0 508 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 LRRC43Q8N309 656 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 C4orf32Q8N8J7 132 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 LPPQ93052 612 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 MTRQ99707 1265 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 AGPAT5Q9NUQ2 364 aa23.66■■□□□ 1.38
LIN54-208ENST00000509748 FAM105AQ9NUU6 356 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms