RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 RNF149Q8NC42 400 aa22.39■■□□□ 1.17
HOXC6-204ENST00000509328 ASAP3Q8TDY4 903 aa22.39■■□□□ 1.17
HOXC6-204ENST00000509328 GPRC5CQ9NQ84 441 aa22.39■■□□□ 1.17
HOXC6-204ENST00000509328 CCDC39Q9UFE4 941 aa22.39■■□□□ 1.17
HOXC6-204ENST00000509328 CUTAO60888 179 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 PLCG1P19174 1290 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 SFPQP23246 707 aaKnown RBP eCLIP22.38■■□□□ 1.17
HOXC6-204ENST00000509328 GLRA2P23416 452 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 PHKA2P46019 1235 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 RAB30Q15771 203 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 RINT1Q6NUQ1 792 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 GPR153Q6NV75 609 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 MYOCDQ8IZQ8 938 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 SYT2Q8N9I0 419 aaPredicted RBP22.38■■□□□ 1.17
HOXC6-204ENST00000509328 LINC01599Q8WXQ3 324 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 PBX4Q9BYU1 374 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 TSPYL2Q9H2G4 693 aaPredicted RBP22.38■■□□□ 1.17
HOXC6-204ENST00000509328 MSRAQ9UJ68 235 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 PCDHA11Q9Y5I1 949 aa22.38■■□□□ 1.17
HOXC6-204ENST00000509328 CSDE1O75534 798 aaKnown RBP22.37■■□□□ 1.17
HOXC6-204ENST00000509328 SSBP05455 408 aaKnown RBP eCLIP22.37■■□□□ 1.17
HOXC6-204ENST00000509328 PLA2G4BP0C869 781 aa22.37■■□□□ 1.17
HOXC6-204ENST00000509328 KRT85P78386 507 aa22.37■■□□□ 1.17
HOXC6-204ENST00000509328 CAPSQ13938 189 aa22.37■■□□□ 1.17
HOXC6-204ENST00000509328 C1orf186Q6ZWK4 172 aa22.37■■□□□ 1.17
HOXC6-204ENST00000509328 RTN4RL1Q86UN2 441 aaPredicted RBP22.37■■□□□ 1.17
HOXC6-204ENST00000509328 TOP1MTQ969P6 601 aa22.37■■□□□ 1.17
HOXC6-204ENST00000509328 RCOR1Q9UKL0 485 aa22.37■■□□□ 1.17
HOXC6-204ENST00000509328 DENND3A2RUS2 1198 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 MGEA5O60502 916 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 GJB5O95377 273 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 FGFR4P22455 802 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 DNAJB2P25686 324 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 PBX2P40425 430 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 RABGGTBP53611 331 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 SLC12A3P55017 1021 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 PTENP60484 403 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 TMCO2Q7Z6W1 182 aaPredicted RBP22.36■■□□□ 1.17
HOXC6-204ENST00000509328 IFNLR1Q8IU57 520 aaPredicted RBP22.36■■□□□ 1.17
HOXC6-204ENST00000509328 KIFAP3Q92845 792 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 ADAM2Q99965 735 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 ZBED2Q9BTP6 218 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 RUSC1Q9BVN2 902 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 TIPINQ9BVW5 301 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 NFKBIZQ9BYH8 718 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 RGS18Q9NS28 235 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 C1orf112Q9NSG2 853 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 BLOC1S4Q9NUP1 217 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 KCND2Q9NZV8 630 aa22.36■■□□□ 1.17
HOXC6-204ENST00000509328 ZSCAN20P17040 1043 aaPredicted RBP22.35■■□□□ 1.17
HOXC6-204ENST00000509328 NCLP19338 710 aaKnown RBP22.35■■□□□ 1.17
HOXC6-204ENST00000509328 GUCY2CP25092 1073 aa22.35■■□□□ 1.17
HOXC6-204ENST00000509328 ME1P48163 572 aa22.35■■□□□ 1.17
HOXC6-204ENST00000509328 DSC3Q14574 896 aa22.35■■□□□ 1.17
HOXC6-204ENST00000509328 PPP2R5AQ15172 486 aa22.35■■□□□ 1.17
HOXC6-204ENST00000509328 CATSPER4Q7RTX7 472 aa22.35■■□□□ 1.17
HOXC6-204ENST00000509328 LRRC15Q8TF66 581 aa22.35■■□□□ 1.17
HOXC6-204ENST00000509328 RAD54LQ92698 747 aa22.35■■□□□ 1.17
HOXC6-204ENST00000509328 MINDY3Q9H8M7 445 aa22.35■■□□□ 1.17
HOXC6-204ENST00000509328 STK17AQ9UEE5 414 aa22.35■■□□□ 1.17
HOXC6-204ENST00000509328 TLL1O43897 1013 aa22.34■■□□□ 1.17
HOXC6-204ENST00000509328 PCBP1Q15365 356 aaKnown RBP eCLIP22.34■■□□□ 1.17
HOXC6-204ENST00000509328 AXDND1Q5T1B0 1012 aaPredicted RBP22.34■■□□□ 1.17
HOXC6-204ENST00000509328 RRAGBQ5VZM2 374 aa22.34■■□□□ 1.17
HOXC6-204ENST00000509328 TIFAQ96CG3 184 aa22.34■■□□□ 1.17
HOXC6-204ENST00000509328 IFT74Q96LB3 600 aa22.34■■□□□ 1.17
HOXC6-204ENST00000509328 DRC1Q96MC2 740 aa22.34■■□□□ 1.17
HOXC6-204ENST00000509328 RAD9AQ99638 391 aa22.34■■□□□ 1.17
HOXC6-204ENST00000509328 CHST12Q9NRB3 414 aa22.34■■□□□ 1.17
HOXC6-204ENST00000509328 RNF216Q9NWF9 866 aaPredicted RBP22.34■■□□□ 1.17
HOXC6-204ENST00000509328 PCDHA7Q9UN72 937 aa22.34■■□□□ 1.17
HOXC6-204ENST00000509328 TMEM265A0A087WTH1 108 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 LRRIQ4A6NIV6 560 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 HIP1RO75146 1068 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 UPP2O95045 317 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 NAMPTP43490 491 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 SARSP49591 514 aaKnown RBP22.33■■□□□ 1.17
HOXC6-204ENST00000509328 MCM6Q14566 821 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 FAM117BQ6P1L5 589 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 CCDC73Q6ZRK6 1079 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 SLC24A5Q71RS6 500 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 BSNDQ8WZ55 320 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 LARP4BQ92615 738 aaKnown RBP22.33■■□□□ 1.17
HOXC6-204ENST00000509328 SPATA32Q96LK8 384 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 DACT1Q9NYF0 836 aa22.33■■□□□ 1.17
HOXC6-204ENST00000509328 YBX2Q9Y2T7 364 aaKnown RBP22.33■■□□□ 1.17
HOXC6-204ENST00000509328 C9IYK1 514 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 INO80B-WBP1J3KQ70 363 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 STAG3L1P0CL83 205 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 MYOGP15173 224 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 HTRA4P83105 476 aaPredicted RBP22.32■■□□□ 1.16
HOXC6-204ENST00000509328 CDCA2Q69YH5 1023 aaPredicted RBP22.32■■□□□ 1.16
HOXC6-204ENST00000509328 SHC4Q6S5L8 630 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 GPBP1Q86WP2 473 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 NPAS4Q8IUM7 802 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 ZBTB8OSQ8IWT0 167 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 LEO1Q8WVC0 666 aaPredicted RBP22.32■■□□□ 1.16
HOXC6-204ENST00000509328 CHAMP1Q96JM3 812 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 SCAND2PQ9GZW5 306 aaPredicted RBP22.32■■□□□ 1.16
HOXC6-204ENST00000509328 C2orf40Q9H1Z8 148 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms