RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 HSD17B14Q9BPX1 270 aa20.81■□□□□ 0.92
UBE3D-207ENST00000509102 ANKEF1Q9NU02 776 aa20.81■□□□□ 0.92
UBE3D-207ENST00000509102 NCK2O43639 380 aa20.8■□□□□ 0.92
UBE3D-207ENST00000509102 EOMESO95936 686 aa20.8■□□□□ 0.92
UBE3D-207ENST00000509102 LINC00271P0C7V0 271 aa20.8■□□□□ 0.92
UBE3D-207ENST00000509102 FGFR4P22455 802 aa20.8■□□□□ 0.92
UBE3D-207ENST00000509102 GATMP50440 423 aa20.8■□□□□ 0.92
UBE3D-207ENST00000509102 ZNF174Q15697 407 aa20.8■□□□□ 0.92
UBE3D-207ENST00000509102 FAM102BQ5T8I3 360 aa20.8■□□□□ 0.92
UBE3D-207ENST00000509102 TWF2Q6IBS0 349 aaKnown RBP20.8■□□□□ 0.92
UBE3D-207ENST00000509102 ECHDC2Q86YB7 292 aa20.8■□□□□ 0.92
UBE3D-207ENST00000509102 ADAMTS19Q8TE59 1207 aa20.8■□□□□ 0.92
UBE3D-207ENST00000509102 PRPF31Q8WWY3 499 aaKnown RBP20.8■□□□□ 0.92
UBE3D-207ENST00000509102 TMEM143Q96AN5 459 aa20.8■□□□□ 0.92
UBE3D-207ENST00000509102 TMEM117Q9H0C3 514 aa20.8■□□□□ 0.92
UBE3D-207ENST00000509102 BMP2KQ9NSY1 1161 aaPredicted RBP20.8■□□□□ 0.92
UBE3D-207ENST00000509102 PIN4Q9Y237 131 aaKnown RBP20.8■□□□□ 0.92
UBE3D-207ENST00000509102 A0A0U1RQF3 1178 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 POTEMA6NI47 508 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 WNT7AO00755 349 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 CSDE1O75534 798 aaKnown RBP20.79■□□□□ 0.92
UBE3D-207ENST00000509102 DGAT1O75907 488 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 SRGAP2CP0DJJ0 459 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 FGFR1P11362 822 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 TECP42680 631 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 TFDP1Q14186 410 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 MXD4Q14582 209 aaPredicted RBP20.79■□□□□ 0.92
UBE3D-207ENST00000509102 SRGAP1Q7Z6B7 1085 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 KSR1Q8IVT5 923 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 LRRC43Q8N309 656 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 ZNF579Q8NAF0 562 aaKnown RBP20.79■□□□□ 0.92
UBE3D-207ENST00000509102 RSPH1Q8WYR4 309 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 TMX3Q96JJ7 454 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 TBC1D32Q96NH3 1257 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 TMEM60Q9H2L4 133 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 UBE2ZQ9H832 354 aaPredicted RBP20.79■□□□□ 0.92
UBE3D-207ENST00000509102 TUFT1Q9NNX1 390 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 PLAGL2Q9UPG8 496 aa20.79■□□□□ 0.92
UBE3D-207ENST00000509102 GRM6O15303 877 aa20.78■□□□□ 0.92
UBE3D-207ENST00000509102 XRCC6P12956 609 aaKnown RBP eCLIP20.78■□□□□ 0.92
UBE3D-207ENST00000509102 LAG3P18627 525 aa20.78■□□□□ 0.92
UBE3D-207ENST00000509102 PHKA2P46019 1235 aa20.78■□□□□ 0.92
UBE3D-207ENST00000509102 RAB27AP51159 221 aa20.78■□□□□ 0.92
UBE3D-207ENST00000509102 NCBP1Q09161 790 aaKnown RBP20.78■□□□□ 0.92
UBE3D-207ENST00000509102 LAMTOR4Q0VGL1 99 aa20.78■□□□□ 0.92
UBE3D-207ENST00000509102 HAUS3Q68CZ6 603 aa20.78■□□□□ 0.92
UBE3D-207ENST00000509102 KLHL23Q8NBE8 558 aa20.78■□□□□ 0.92
UBE3D-207ENST00000509102 UHRF1Q96T88 793 aaPredicted RBP20.78■□□□□ 0.92
UBE3D-207ENST00000509102 RAB34Q9BZG1 259 aa20.78■□□□□ 0.92
UBE3D-207ENST00000509102 ALG13Q9NP73 1137 aaKnown RBP20.78■□□□□ 0.92
UBE3D-207ENST00000509102 REV3LO60673 3130 aa20.78■□□□□ 0.92
UBE3D-207ENST00000509102 H3BQV1 296 aa20.77■□□□□ 0.92
UBE3D-207ENST00000509102 U2AF2P26368 475 aaKnown RBP eCLIP20.77■□□□□ 0.92
UBE3D-207ENST00000509102 PCBP1Q15365 356 aaKnown RBP eCLIP20.77■□□□□ 0.92
UBE3D-207ENST00000509102 TCEAL5Q5H9L2 206 aa20.77■□□□□ 0.92
UBE3D-207ENST00000509102 MCTP1Q6DN14 999 aa20.77■□□□□ 0.92
UBE3D-207ENST00000509102 EP400NLQ6ZTU2 488 aa20.77■□□□□ 0.92
UBE3D-207ENST00000509102 FERMT3Q86UX7 667 aa20.77■□□□□ 0.92
UBE3D-207ENST00000509102 THNSL1Q8IYQ7 743 aa20.77■□□□□ 0.92
UBE3D-207ENST00000509102 RNF149Q8NC42 400 aa20.77■□□□□ 0.92
UBE3D-207ENST00000509102 TRAIPQ9BWF2 469 aa20.77■□□□□ 0.92
UBE3D-207ENST00000509102 MRPL9Q9BYD2 267 aaKnown RBP20.77■□□□□ 0.92
UBE3D-207ENST00000509102 TYW1Q9NV66 732 aaKnown RBP20.77■□□□□ 0.92
UBE3D-207ENST00000509102 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.77■□□□□ 0.92
UBE3D-207ENST00000509102 STK24Q9Y6E0 443 aa20.77■□□□□ 0.92
UBE3D-207ENST00000509102 VCANP13611 3396 aa20.77■□□□□ 0.91
UBE3D-207ENST00000509102 ZBTB39O15060 712 aa20.76■□□□□ 0.91
UBE3D-207ENST00000509102 ERLIN2O94905 339 aa20.76■□□□□ 0.91
UBE3D-207ENST00000509102 CSPG5O95196 566 aa20.76■□□□□ 0.91
UBE3D-207ENST00000509102 ITGB1P05556 798 aa20.76■□□□□ 0.91
UBE3D-207ENST00000509102 KCNA5P22460 613 aa20.76■□□□□ 0.91
UBE3D-207ENST00000509102 RARRES1P49788 294 aa20.76■□□□□ 0.91
UBE3D-207ENST00000509102 KCNQ1P51787 676 aa20.76■□□□□ 0.91
UBE3D-207ENST00000509102 UBE3AQ05086 875 aa20.76■□□□□ 0.91
UBE3D-207ENST00000509102 NACC1Q96RE7 527 aa20.76■□□□□ 0.91
UBE3D-207ENST00000509102 POLR3CQ9BUI4 534 aaPredicted RBP20.76■□□□□ 0.91
UBE3D-207ENST00000509102 IFT122Q9HBG6 1241 aa20.76■□□□□ 0.91
UBE3D-207ENST00000509102 SMC3Q9UQE7 1217 aa20.76■□□□□ 0.91
UBE3D-207ENST00000509102 TNFRSF10AO00220 468 aa20.75■□□□□ 0.91
UBE3D-207ENST00000509102 BMP1P13497 986 aa20.75■□□□□ 0.91
UBE3D-207ENST00000509102 PPM1AP35813 382 aa20.75■□□□□ 0.91
UBE3D-207ENST00000509102 SPPL3Q8TCT6 385 aa20.75■□□□□ 0.91
UBE3D-207ENST00000509102 PIGOQ8TEQ8 1089 aa20.75■□□□□ 0.91
UBE3D-207ENST00000509102 POF1BQ8WVV4 589 aa20.75■□□□□ 0.91
UBE3D-207ENST00000509102 PGBD4Q96DM1 585 aa20.75■□□□□ 0.91
UBE3D-207ENST00000509102 PABPC5Q96DU9 382 aaKnown RBP20.75■□□□□ 0.91
UBE3D-207ENST00000509102 CASD1Q96PB1 797 aa20.75■□□□□ 0.91
UBE3D-207ENST00000509102 AGPAT5Q9NUQ2 364 aa20.75■□□□□ 0.91
UBE3D-207ENST00000509102 PUF60Q9UHX1 559 aaKnown RBP20.75■□□□□ 0.91
UBE3D-207ENST00000509102 TTC28Q96AY4 2481 aa20.75■□□□□ 0.91
UBE3D-207ENST00000509102 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.74■□□□□ 0.91
UBE3D-207ENST00000509102 CARNS1A5YM72 827 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 LAD1O00515 517 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 MUTP22033 750 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 RPA1P27694 616 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 GJB2P29033 226 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 PUS10Q3MIT2 529 aaKnown RBP20.74■□□□□ 0.91
UBE3D-207ENST00000509102 FNDC1Q4ZHG4 1894 aaPredicted RBP20.74■□□□□ 0.91
UBE3D-207ENST00000509102 GLB1LQ6UWU2 654 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 CATSPER3Q86XQ3 398 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms