RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 ABHD15Q6UXT9 468 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 FASTKD5Q7L8L6 764 aaKnown RBP10.08□□□□□ -0.8
HTT-205ENST00000509043 ZNF572Q7Z3I7 529 aaPredicted RBP10.08□□□□□ -0.8
HTT-205ENST00000509043 IRF2BP2Q7Z5L9 587 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 MAP4K3Q8IVH8 894 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 EXOC8Q8IYI6 725 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 ANKRD35Q8N283 1001 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 ATRIPQ8WXE1 791 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 WNK4Q96J92 1243 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 IFT74Q96LB3 600 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 CRACR2AQ9BSW2 395 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 KIAA1586Q9HCI6 787 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 DDX41Q9UJV9 622 aaKnown RBP10.08□□□□□ -0.8
HTT-205ENST00000509043 KCNH4Q9UQ05 1017 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 IGSF9BQ9UPX0 1349 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 WDR90Q96KV7 1748 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 SBF1O95248 1867 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 A0A0A6YYK5 440 aaPredicted RBP10.07□□□□□ -0.8
HTT-205ENST00000509043 TARSL2A2RTX5 802 aaKnown RBP10.07□□□□□ -0.8
HTT-205ENST00000509043 RCCD1A6NED2 376 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 CES2O00748 559 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 RGS20O76081 388 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 SUPT20HL2P0C7V6 817 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 GARTP22102 1010 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 EDNRBP24530 442 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 CYP2J2P51589 502 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 VAMP7P51809 220 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 ACTR2P61160 394 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 IRX3P78415 501 aaPredicted RBP10.07□□□□□ -0.8
HTT-205ENST00000509043 PPIL2Q13356 520 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 NEDD9Q14511 834 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 PLS1Q14651 629 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 NAB2Q15742 525 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 UGCGQ16739 394 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 GLIPR1L2Q4G1C9 344 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 BRDTQ58F21 947 aaPredicted RBP10.07□□□□□ -0.8
HTT-205ENST00000509043 FAM102BQ5T8I3 360 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 PRAMEF18Q5VWM3 479 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 ANO5Q75V66 913 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 MSL3Q8N5Y2 521 aaKnown RBP10.07□□□□□ -0.8
HTT-205ENST00000509043 FAM133AQ8N9E0 248 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 TMEM161BQ8NDZ6 487 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 LMBR1Q8WVP7 490 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 ZFP91Q96JP5 570 aaPredicted RBP10.07□□□□□ -0.8
HTT-205ENST00000509043 CEP170P1Q96L14 293 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 SPATC1LQ9H0A9 340 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 ATP6V0A4Q9HBG4 840 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 SIX2Q9NPC8 291 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 PDLIM7Q9NR12 457 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 RNF181Q9P0P0 153 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 GABBR1Q9UBS5 961 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 APEX2Q9UBZ4 518 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.07□□□□□ -0.8
HTT-205ENST00000509043 RAB21Q9UL25 225 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 TBX20Q9UMR3 447 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 SNX12Q9UMY4 172 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 AGTPBP1Q9UPW5 1226 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 HYOU1Q9Y4L1 999 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 FHOD1Q9Y613 1164 aa10.07□□□□□ -0.8
HTT-205ENST00000509043 V9GYY5 206 aaPredicted RBP10.07□□□□□ -0.8
HTT-205ENST00000509043 COL11A1P12107 1806 aaPredicted RBP10.06□□□□□ -0.8
HTT-205ENST00000509043 MACROD2A1Z1Q3 448 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 F8VZ95 297 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 GAS2O43903 313 aaKnown RBP10.06□□□□□ -0.8
HTT-205ENST00000509043 DDNO94850 711 aaPredicted RBP10.06□□□□□ -0.8
HTT-205ENST00000509043 STBD1O95210 358 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 ABL1P00519 1130 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 ATP1A1P05023 1023 aaKnown RBP10.06□□□□□ -0.8
HTT-205ENST00000509043 ERCC3P19447 782 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 OSBPP22059 807 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 SOX5P35711 763 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 RFC5P40937 340 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 NPTX2P47972 431 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 ALDH5A1P51649 535 aaPredicted RBP10.06□□□□□ -0.8
HTT-205ENST00000509043 CLCN6P51797 869 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 NPEPPSP55786 919 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 PEX3P56589 373 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 PRKCEQ02156 737 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 GFPT1Q06210 699 aaPredicted RBP10.06□□□□□ -0.8
HTT-205ENST00000509043 FAM160B1Q5W0V3 765 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 SWSAP1Q6NVH7 229 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 WDR93Q6P2C0 686 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 ARMC9Q7Z3E5 817 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 LRRN4CLQ8ND94 238 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 TMC2Q8TDI7 906 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 FAM167AQ96KS9 214 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 NIFKQ9BYG3 293 aaKnown RBP10.06□□□□□ -0.8
HTT-205ENST00000509043 FHDC1Q9C0D6 1143 aaPredicted RBP10.06□□□□□ -0.8
HTT-205ENST00000509043 INTS2Q9H0H0 1204 aaKnown RBP10.06□□□□□ -0.8
HTT-205ENST00000509043 ARFGAP3Q9NP61 516 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 KMT5AQ9NQR1 393 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 CYP26B1Q9NR63 512 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 HSPBP1Q9NZL4 362 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 TRIM10Q9UDY6 481 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 PCDHGC5Q9Y5F6 944 aa10.06□□□□□ -0.8
HTT-205ENST00000509043 MAFBQ9Y5Q3 323 aaPredicted RBP10.06□□□□□ -0.8
HTT-205ENST00000509043 A0A087X0T9 212 aa10.05□□□□□ -0.8
HTT-205ENST00000509043 IGKV6D-21A0A0A0MT36 114 aa10.05□□□□□ -0.8
HTT-205ENST00000509043 CCDC169A6NNP5 214 aa10.05□□□□□ -0.8
HTT-205ENST00000509043 ZRANB2O95218 330 aaKnown RBP eCLIP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms