RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 MAGEF1Q9HAY2 307 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 C1orf112Q9NSG2 853 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 BMP2KQ9NSY1 1161 aaPredicted RBP10.13□□□□□ -0.79
NUP54-207ENST00000508583 DACT1Q9NYF0 836 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 CHMP5Q9NZZ3 219 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 PADI3Q9ULW8 664 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 TRIOBPQ9H2D6 2365 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 TET1Q8NFU7 2136 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 DENND3A2RUS2 1198 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 GOLGA6L4A6NEF3 574 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 E9PMD0 336 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 KRT18P05783 430 aaKnown RBP10.12□□□□□ -0.79
NUP54-207ENST00000508583 SRGAP2CP0DJJ0 459 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 SKIP12755 728 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 ATP2A2P16615 1042 aaKnown RBP10.12□□□□□ -0.79
NUP54-207ENST00000508583 CD52P31358 61 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 ARL2P36404 184 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 NAMPTP43490 491 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 EFNA5P52803 228 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 SMTNP53814 917 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 SMAD3P84022 425 aaKnown RBP10.12□□□□□ -0.79
NUP54-207ENST00000508583 AMPD3Q01432 767 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 GRIN1Q05586 938 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 MKRN4PQ13434 485 aaPredicted RBP10.12□□□□□ -0.79
NUP54-207ENST00000508583 RAB30Q15771 203 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 ECM1Q16610 540 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 C9orf50Q5SZB4 431 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 ADALQ6DHV7 355 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 RINT1Q6NUQ1 792 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 C16orf59Q7L2K0 433 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 IQUBQ8NA54 791 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 SLC17A8Q8NDX2 589 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 LEO1Q8WVC0 666 aaPredicted RBP10.12□□□□□ -0.79
NUP54-207ENST00000508583 RSPH1Q8WYR4 309 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 RAD54LQ92698 747 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 EPSTI1Q96J88 318 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 CLIC6Q96NY7 704 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 PNMA5Q96PV4 448 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 PPP1R16BQ96T49 567 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 XPNPEP1Q9NQW7 623 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 CHST12Q9NRB3 414 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 LARSQ9P2J5 1176 aaKnown RBP10.12□□□□□ -0.79
NUP54-207ENST00000508583 MSRAQ9UJ68 235 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 ODF2LQ9ULJ1 636 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 ZDHHC9Q9Y397 364 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 MICAL3Q7RTP6 2002 aa10.12□□□□□ -0.79
NUP54-207ENST00000508583 A0A087WZ62 844 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 LRRIQ4A6NIV6 560 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 TBCAO75347 108 aaKnown RBP10.11□□□□□ -0.79
NUP54-207ENST00000508583 STAG3L1P0CL83 205 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 AXLP30530 894 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 SLC12A3P55017 1021 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 PTENP60484 403 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 WDR5P61964 334 aaKnown RBP10.11□□□□□ -0.79
NUP54-207ENST00000508583 DRP2Q13474 957 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 GPNMBQ14956 572 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 HABP4Q5JVS0 413 aaKnown RBP10.11□□□□□ -0.79
NUP54-207ENST00000508583 SPECC1Q5M775 1068 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 GPR153Q6NV75 609 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 C1orf186Q6ZWK4 172 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 SV2BQ7L1I2 683 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 MAEAQ7L5Y9 396 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 CATSPER4Q7RTX7 472 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 APBB1IPQ7Z5R6 666 aaPredicted RBP10.11□□□□□ -0.79
NUP54-207ENST00000508583 FAM228AQ86W67 206 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 GPBP1Q86WP2 473 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 IFNLR1Q8IU57 520 aaPredicted RBP10.11□□□□□ -0.79
NUP54-207ENST00000508583 DEPTORQ8TB45 409 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 VWCEQ96DN2 955 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 CCDC51Q96ER9 411 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 PRIMPOLQ96LW4 560 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 PLIN2Q99541 437 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 FDXACB1Q9BRP7 624 aaPredicted RBP10.11□□□□□ -0.79
NUP54-207ENST00000508583 ZBED2Q9BTP6 218 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 TSPYL2Q9H2G4 693 aaPredicted RBP10.11□□□□□ -0.79
NUP54-207ENST00000508583 AGO3Q9H9G7 860 aaKnown RBP10.11□□□□□ -0.79
NUP54-207ENST00000508583 ERVK-5Q9HDB9 667 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 USP25Q9UHP3 1055 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 PCDHA7Q9UN72 937 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 ST3GAL5Q9UNP4 418 aa10.11□□□□□ -0.79
NUP54-207ENST00000508583 NOC2LQ9Y3T9 749 aaKnown RBP10.11□□□□□ -0.79
NUP54-207ENST00000508583 RBM19Q9Y4C8 960 aaKnown RBP10.11□□□□□ -0.79
NUP54-207ENST00000508583 LAMA3Q16787 3333 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 TMEM265A0A087WTH1 108 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 A0A087WWV3 80 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 INO80B-WBP1J3KQ70 363 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 HOXA2O43364 376 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 HIP1RO75146 1068 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 FAM13AO94988 1023 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 GLRA2P23416 452 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 CMA1P23946 247 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 RAB27AP51159 221 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 CAPSQ13938 189 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 MAPK6Q16659 721 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 AXDND1Q5T1B0 1012 aaPredicted RBP10.1□□□□□ -0.79
NUP54-207ENST00000508583 RESP18Q5W5W9 173 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 CDCA2Q69YH5 1023 aaPredicted RBP10.1□□□□□ -0.79
NUP54-207ENST00000508583 SLC24A5Q71RS6 500 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 KCNK18Q7Z418 384 aa10.1□□□□□ -0.79
NUP54-207ENST00000508583 NPAS4Q8IUM7 802 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms