RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 LPXNO60711 386 aa22.13■■□□□ 1.13
SFXN1-209ENST00000508290 EOMESO95936 686 aa22.13■■□□□ 1.13
SFXN1-209ENST00000508290 PHKA2P46019 1235 aa22.13■■□□□ 1.13
SFXN1-209ENST00000508290 LAMTOR4Q0VGL1 99 aa22.13■■□□□ 1.13
SFXN1-209ENST00000508290 ARL6IP4Q66PJ3 421 aaKnown RBP22.13■■□□□ 1.13
SFXN1-209ENST00000508290 TMEM143Q96AN5 459 aa22.13■■□□□ 1.13
SFXN1-209ENST00000508290 LMAN2LQ9H0V9 348 aa22.13■■□□□ 1.13
SFXN1-209ENST00000508290 DAXXQ9UER7 740 aaPredicted RBP22.13■■□□□ 1.13
SFXN1-209ENST00000508290 A0A0U1RQF3 1178 aa22.12■■□□□ 1.13
SFXN1-209ENST00000508290 K7ELQ4 463 aaPredicted RBP22.12■■□□□ 1.13
SFXN1-209ENST00000508290 RFXAPO00287 272 aa22.12■■□□□ 1.13
SFXN1-209ENST00000508290 BMPR1AP36894 532 aa22.12■■□□□ 1.13
SFXN1-209ENST00000508290 RAB27AP51159 221 aa22.12■■□□□ 1.13
SFXN1-209ENST00000508290 ATP2C1P98194 919 aaPredicted RBP22.12■■□□□ 1.13
SFXN1-209ENST00000508290 GDPD5Q8WTR4 605 aa22.12■■□□□ 1.13
SFXN1-209ENST00000508290 P2RX5Q93086 422 aa22.12■■□□□ 1.13
SFXN1-209ENST00000508290 NFKBIZQ9BYH8 718 aa22.12■■□□□ 1.13
SFXN1-209ENST00000508290 IFT122Q9HBG6 1241 aa22.12■■□□□ 1.13
SFXN1-209ENST00000508290 AAASQ9NRG9 546 aa22.12■■□□□ 1.13
SFXN1-209ENST00000508290 TRANK1O15050 2925 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 ZBTB39O15060 712 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 MED24O75448 989 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 CTNNB1P35222 781 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 NCBP1Q09161 790 aaKnown RBP22.11■■□□□ 1.13
SFXN1-209ENST00000508290 GPM6BQ13491 265 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 NBR1Q14596 966 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 CSPP1Q1MSJ5 1256 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 KRT79Q5XKE5 535 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 CATSPER4Q7RTX7 472 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 SPRED2Q7Z698 418 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 IFNLR1Q8IU57 520 aaPredicted RBP22.11■■□□□ 1.13
SFXN1-209ENST00000508290 ABI1Q8IZP0 508 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 PIGOQ8TEQ8 1089 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 SNX21Q969T3 373 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 MRPL38Q96DV4 380 aaKnown RBP22.11■■□□□ 1.13
SFXN1-209ENST00000508290 XPNPEP1Q9NQW7 623 aa22.11■■□□□ 1.13
SFXN1-209ENST00000508290 CARNS1A5YM72 827 aa22.1■■□□□ 1.13
SFXN1-209ENST00000508290 CCT6AP40227 531 aaKnown RBP22.1■■□□□ 1.13
SFXN1-209ENST00000508290 TIGD5Q53EQ6 642 aa22.1■■□□□ 1.13
SFXN1-209ENST00000508290 ECHDC2Q86YB7 292 aa22.1■■□□□ 1.13
SFXN1-209ENST00000508290 KSR1Q8IVT5 923 aa22.1■■□□□ 1.13
SFXN1-209ENST00000508290 RNF149Q8NC42 400 aa22.1■■□□□ 1.13
SFXN1-209ENST00000508290 ATXN2LQ8WWM7 1075 aaKnown RBP22.1■■□□□ 1.13
SFXN1-209ENST00000508290 ZNF668Q96K58 619 aaPredicted RBP22.1■■□□□ 1.13
SFXN1-209ENST00000508290 TMEM117Q9H0C3 514 aa22.1■■□□□ 1.13
SFXN1-209ENST00000508290 AGPAT5Q9NUQ2 364 aa22.1■■□□□ 1.13
SFXN1-209ENST00000508290 PIN4Q9Y237 131 aaKnown RBP22.1■■□□□ 1.13
SFXN1-209ENST00000508290 RALGAPA2Q2PPJ7 1873 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 ARHGEF35A5YM69 484 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 SLC26A4O43511 780 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 LINC00271P0C7V0 271 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 SRGAP2CP0DJJ0 459 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 PDIA4P13667 645 aaKnown RBP22.09■■□□□ 1.13
SFXN1-209ENST00000508290 AXLP30530 894 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 ARL2P36404 184 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 TWF2Q6IBS0 349 aaKnown RBP22.09■■□□□ 1.13
SFXN1-209ENST00000508290 POTEGQ6S5H5 508 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 SNX29Q8TEQ0 813 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 CCDC51Q96ER9 411 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 THEGQ9P2T0 379 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 COG5Q9UP83 839 aa22.09■■□□□ 1.13
SFXN1-209ENST00000508290 MRPL42Q9Y6G3 142 aaKnown RBP22.09■■□□□ 1.13
SFXN1-209ENST00000508290 LOXHD1Q8IVV2 1947 aa22.08■■□□□ 1.13
SFXN1-209ENST00000508290 USO1O60763 962 aaKnown RBP22.08■■□□□ 1.13
SFXN1-209ENST00000508290 ERLIN2O94905 339 aa22.08■■□□□ 1.13
SFXN1-209ENST00000508290 PTENP60484 403 aa22.08■■□□□ 1.13
SFXN1-209ENST00000508290 AAK1Q2M2I8 961 aa22.08■■□□□ 1.13
SFXN1-209ENST00000508290 MICALL1Q8N3F8 863 aa22.08■■□□□ 1.13
SFXN1-209ENST00000508290 PPM1EQ8WY54 764 aa22.08■■□□□ 1.13
SFXN1-209ENST00000508290 AK8Q96MA6 479 aa22.08■■□□□ 1.13
SFXN1-209ENST00000508290 MRPL9Q9BYD2 267 aaKnown RBP22.08■■□□□ 1.13
SFXN1-209ENST00000508290 BMP2KQ9NSY1 1161 aaPredicted RBP22.08■■□□□ 1.13
SFXN1-209ENST00000508290 ARID2Q68CP9 1835 aa22.08■■□□□ 1.12
SFXN1-209ENST00000508290 COL4A4P53420 1690 aaPredicted RBP22.07■■□□□ 1.12
SFXN1-209ENST00000508290 VPS37CA5D8V6 355 aaPredicted RBP22.07■■□□□ 1.12
SFXN1-209ENST00000508290 ZNF623O75123 536 aa22.07■■□□□ 1.12
SFXN1-209ENST00000508290 CYP11B2P19099 503 aa22.07■■□□□ 1.12
SFXN1-209ENST00000508290 CCDC85BQ15834 202 aaPredicted RBP22.07■■□□□ 1.12
SFXN1-209ENST00000508290 LRRC43Q8N309 656 aa22.07■■□□□ 1.12
SFXN1-209ENST00000508290 CNNM3Q8NE01 707 aa22.07■■□□□ 1.12
SFXN1-209ENST00000508290 PGBD4Q96DM1 585 aa22.07■■□□□ 1.12
SFXN1-209ENST00000508290 DNM3Q9UQ16 869 aa22.07■■□□□ 1.12
SFXN1-209ENST00000508290 PCDHB12Q9Y5F1 795 aa22.07■■□□□ 1.12
SFXN1-209ENST00000508290 TBKBP1A7MCY6 615 aa22.06■■□□□ 1.12
SFXN1-209ENST00000508290 LAG3P18627 525 aa22.06■■□□□ 1.12
SFXN1-209ENST00000508290 FGFR4P22455 802 aa22.06■■□□□ 1.12
SFXN1-209ENST00000508290 PPP2R5AQ15172 486 aa22.06■■□□□ 1.12
SFXN1-209ENST00000508290 PAN2Q504Q3 1202 aaKnown RBP22.06■■□□□ 1.12
SFXN1-209ENST00000508290 PADI6Q6TGC4 694 aa22.06■■□□□ 1.12
SFXN1-209ENST00000508290 ZNF598Q86UK7 904 aaKnown RBP22.06■■□□□ 1.12
SFXN1-209ENST00000508290 NT5C3AQ9H0P0 336 aa22.06■■□□□ 1.12
SFXN1-209ENST00000508290 POLR3FQ9H1D9 316 aaPredicted RBP22.06■■□□□ 1.12
SFXN1-209ENST00000508290 FAM105AQ9NUU6 356 aa22.06■■□□□ 1.12
SFXN1-209ENST00000508290 KIAA1024Q9UPX6 916 aa22.06■■□□□ 1.12
SFXN1-209ENST00000508290 CSDE1O75534 798 aaKnown RBP22.05■■□□□ 1.12
SFXN1-209ENST00000508290 GLRA2P23416 452 aa22.05■■□□□ 1.12
SFXN1-209ENST00000508290 UBE3AQ05086 875 aa22.05■■□□□ 1.12
SFXN1-209ENST00000508290 CAPSQ13938 189 aa22.05■■□□□ 1.12
SFXN1-209ENST00000508290 SKIV2LQ15477 1246 aaKnown RBP22.05■■□□□ 1.12
SFXN1-209ENST00000508290 FAM102BQ5T8I3 360 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms