RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 PAN2Q504Q3 1202 aaKnown RBP2.38□□□□□ -2.03
SMN2-208ENST00000508258 ARHGAP29Q52LW3 1261 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 CT83Q5H943 113 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 TOR2AQ5JU69 321 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 ZBTB41Q5SVQ8 909 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 PPP4R4Q6NUP7 873 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 TTLL7Q6ZT98 887 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 ESPNLQ6ZVH7 1005 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 PRRT2Q7Z6L0 340 aaPredicted RBP2.38□□□□□ -2.03
SMN2-208ENST00000508258 SLC41A1Q8IVJ1 513 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 PRR18Q8N4B5 295 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 ARRDC4Q8NCT1 418 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 DIS3LQ8TF46 1054 aaKnown RBP2.38□□□□□ -2.03
SMN2-208ENST00000508258 HPS3Q969F9 1004 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 COA7Q96BR5 231 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 EAF2Q96CJ1 260 aaPredicted RBP2.38□□□□□ -2.03
SMN2-208ENST00000508258 DDX11Q96FC9 970 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 PEX11GQ96HA9 241 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 RAX2Q96IS3 184 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 MAML3Q96JK9 1138 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 GBP4Q96PP9 640 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 MPHOSPH6Q99547 160 aaKnown RBP2.38□□□□□ -2.03
SMN2-208ENST00000508258 SPATA25Q9BR10 227 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 KRTAP4-9Q9BYQ8 210 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 GTPBP4Q9BZE4 634 aaKnown RBP2.38□□□□□ -2.03
SMN2-208ENST00000508258 RNF38Q9H0F5 515 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 AP5M1Q9H0R1 490 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 CSRNP2Q9H175 543 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 XYLT2Q9H1B5 865 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 PRDM12Q9H4Q4 367 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 MAN1C1Q9NR34 630 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 C1orf112Q9NSG2 853 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 RIC8BQ9NVN3 520 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 RTEL1Q9NZ71 1219 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 KCNG1Q9UIX4 513 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 TUBD1Q9UJT1 453 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 PALD1Q9ULE6 856 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 DNM3Q9UQ16 869 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 SIT1Q9Y3P8 196 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 ASB1Q9Y576 335 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 NUMBLQ9Y6R0 609 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 FRMPD2Q68DX3 1309 aaPredicted RBP2.38□□□□□ -2.03
SMN2-208ENST00000508258 UBA6A0AVT1 1052 aaPredicted RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 PRAMEF25A6NGN4 478 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 A6NNZ2 444 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 APAF1O14727 1248 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 FFAR3O14843 346 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 AP1G1O43747 822 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 CTNND1O60716 968 aaKnown RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 OFD1O75665 1012 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 PRPF6O94906 941 aaKnown RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 PLA2G1BP04054 148 aaKnown RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 HRGP04196 525 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 PFKMP08237 780 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 CELA3BP08861 270 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 CLEC2LP0C7M8 214 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 OSMP13725 252 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 PDCP20941 246 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 IGFBP6P24592 240 aaPredicted RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 WASP42768 502 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 HTR3AP46098 478 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 FXR1P51114 621 aaKnown RBP eCLIP2.37□□□□□ -2.03
SMN2-208ENST00000508258 SLC5A3P53794 718 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 SLURP1P55000 103 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 GJA9P57773 515 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 ZNF280AP59817 542 aaPredicted RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 ALDH6A1Q02252 535 aaKnown RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 GRIN1Q05586 938 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 OS9Q13438 667 aaPredicted RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 SMAD4Q13485 552 aaKnown RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 MORC3Q14149 939 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 TRIM25Q14258 630 aaKnown RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 ZNF267Q14586 743 aaPredicted RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 SLC9A5Q14940 896 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 SAFBQ15424 915 aaKnown RBP eCLIP2.37□□□□□ -2.03
SMN2-208ENST00000508258 ANO4Q32M45 955 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 LONRF3Q496Y0 759 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 COBLL1Q53SF7 1204 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 TTC38Q5R3I4 469 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 UBXN11Q5T124 520 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 IFIT1BQ5T764 474 aaKnown RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 NT5DC1Q5TFE4 455 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 IL31Q6EBC2 164 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 KIAA1841Q6NSI8 718 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 TIGD7Q6NT04 549 aaPredicted RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 CCDC62Q6P9F0 684 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 UNQ6494/PRO21346Q6UXR6 183 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 MILR1Q7Z6M3 343 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 C11orf96Q7Z7L8 435 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 B3GNT8Q7Z7M8 397 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 MIER2Q8N344 545 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 C7orf31Q8N865 590 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 SMARCC2Q8TAQ2 1214 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 FNIP1Q8TF40 1166 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 ZNF526Q8TF50 670 aaPredicted RBP2.37□□□□□ -2.03
SMN2-208ENST00000508258 TSPEARQ8WU66 669 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 RSAD2Q8WXG1 361 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 TTC17Q96AE7 1141 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 E2F7Q96AV8 911 aa2.37□□□□□ -2.03
SMN2-208ENST00000508258 ZBTB8AQ96BR9 441 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms