RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SPOPLQ6IQ16 392 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 CYP2U1Q7Z449 544 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 INPP5DQ92835 1189 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 BRF1Q92994 677 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 SPATA17Q96L03 361 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 TTC1Q99614 292 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 NEURL2Q9BR09 285 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 LRMDAQ9H2I8 198 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 SLC38A10Q9HBR0 1119 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 INTS13Q9NVM9 706 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 GIN1Q9NXP7 522 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 SAMD15Q9P1V8 674 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 NKX1-2Q9UD57 310 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 PASKQ96RG2 1323 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 FUOMA2VDF0 154 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 ZNF862O60290 1169 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 OLFM2O95897 454 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 ANXA13P27216 316 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 GSSP48637 474 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 BCAP31P51572 246 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 KRT83P78385 493 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 EXOSC9Q06265 439 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 HSP90AA5PQ58FG0 334 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 HERC4Q5GLZ8 1057 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 RAD9BQ6WBX8 426 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 TMTC1Q8IUR5 882 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 ARHGAP24Q8N264 748 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 DPF2Q92785 391 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 FERMT2Q96AC1 680 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 FBXL18Q96ME1 805 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 CIB1Q99828 191 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 DESI2Q9BSY9 194 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 CDCA7Q9BWT1 371 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 GLT8D2Q9H1C3 349 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 GGNBP2Q9H3C7 697 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 HAUS4Q9H6D7 363 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 PLGRKTQ9HBL7 147 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 HMGXB4Q9UGU5 601 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 TUBE1Q9UJT0 475 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 SNX14Q9Y5W7 946 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 TACC3Q9Y6A5 838 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 TOPBP1Q92547 1522 aa11.58□□□□□ -0.55
PDLIM5-210ENST00000508216 PCDH11XQ9BZA7 1347 aa11.58□□□□□ -0.55
PDLIM5-210ENST00000508216 GLI2P10070 1586 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 NEO1Q92859 1461 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 SYCE1LA8MT33 242 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 ATP2C2O75185 946 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 UBOX5O94941 541 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 CHRNEQ04844 493 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 CDK18Q07002 472 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 ST3GAL1Q11201 340 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 MTX1Q13505 466 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 NFE2L1Q14494 772 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 KCTD2Q14681 263 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 PHKG1Q16816 387 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 CEP78Q5JTW2 689 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 TRAPPC3LQ5T215 181 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 MAP3K21Q5TCX8 1036 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 MEX3CQ5U5Q3 659 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 ILDR2Q71H61 639 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 GLMNQ92990 594 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 DNAJC18Q9H819 358 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 POLMQ9NP87 494 aaPredicted RBP11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 GDF3Q9NR23 364 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 DDX56Q9NY93 547 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 UVRAGQ9P2Y5 699 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 STX8Q9UNK0 236 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 IFT52Q9Y366 437 aa11.58□□□□□ -0.56
PDLIM5-210ENST00000508216 MAGI3Q5TCQ9 1506 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 LRRC7Q96NW7 1537 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 A0A1W2PQ67 120 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 OR5K4A6NMS3 321 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 GCOM1H8Y6P7 765 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 PFDN6O15212 129 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 ADCY3O60266 1144 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 NMT2O60551 498 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 CRYZL1O95825 349 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 MYZAPP0CAP1 466 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 CFL1P23528 166 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 MZF1P28698 734 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 UBA7P41226 1012 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 HNRNPFP52597 415 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 PDE1AP54750 535 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 UBXN2AP68543 259 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 DHX9Q08211 1270 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 PCSK7Q16549 785 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 RESP18Q5W5W9 173 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 FCRLBQ6BAA4 426 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 NIPAL1Q6NVV3 410 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 RFPL4BQ6ZWI9 263 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 NET1Q7Z628 596 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 NELFCDQ8IXH7 590 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 IFT20Q8IY31 132 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 GSPT2Q8IYD1 628 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 SIX5Q8N196 739 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 ATP6V0D2Q8N8Y2 350 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 NPLOC4Q8TAT6 608 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms