RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 KRT2P35908 639 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 NPEPPSP55786 919 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 ERVFC1P60507 584 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 ZP2Q05996 745 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 NR5A1Q13285 461 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 EPHA7Q15375 998 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 SMAD2Q15796 467 aaKnown RBP23.34■■□□□ 1.33
CLDND1-216ENST00000507944 TMEM31Q5JXX7 168 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 ZNF410Q86VK4 478 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 INO80BQ9C086 356 aaPredicted RBP23.34■■□□□ 1.33
CLDND1-216ENST00000507944 TLE6Q9H808 572 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 BRMS1Q9HCU9 246 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 FAM205CA6NFA0 338 aa23.33■■□□□ 1.33
CLDND1-216ENST00000507944 BAG4O95429 457 aaKnown RBP23.33■■□□□ 1.33
CLDND1-216ENST00000507944 SFPQP23246 707 aaKnown RBP eCLIP23.33■■□□□ 1.33
CLDND1-216ENST00000507944 NEK4P51957 841 aa23.33■■□□□ 1.33
CLDND1-216ENST00000507944 SMAD4Q13485 552 aaKnown RBP23.33■■□□□ 1.33
CLDND1-216ENST00000507944 CLLU1OSQ5K130 101 aa23.33■■□□□ 1.33
CLDND1-216ENST00000507944 ZNF598Q86UK7 904 aaKnown RBP23.33■■□□□ 1.33
CLDND1-216ENST00000507944 POTEDQ86YR6 584 aa23.33■■□□□ 1.33
CLDND1-216ENST00000507944 ADHFE1Q8IWW8 467 aa23.33■■□□□ 1.33
CLDND1-216ENST00000507944 LRRC43Q8N309 656 aa23.33■■□□□ 1.33
CLDND1-216ENST00000507944 WRAP73Q9P2S5 460 aaPredicted RBP23.33■■□□□ 1.33
CLDND1-216ENST00000507944 PUF60Q9UHX1 559 aaKnown RBP23.33■■□□□ 1.33
CLDND1-216ENST00000507944 C19orf67A6NJJ6 358 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 GPR37L1O60883 481 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 PLCB3Q01970 1234 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 PDE12Q6L8Q7 609 aaKnown RBP23.32■■□□□ 1.32
CLDND1-216ENST00000507944 KCNT2Q6UVM3 1135 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 KSR1Q8IVT5 923 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 SLFN12Q8IYM2 578 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 ZNF579Q8NAF0 562 aaKnown RBP23.32■■□□□ 1.32
CLDND1-216ENST00000507944 NSUN7Q8NE18 718 aaKnown RBP23.32■■□□□ 1.32
CLDND1-216ENST00000507944 MRPS27Q92552 414 aaKnown RBP23.32■■□□□ 1.32
CLDND1-216ENST00000507944 TNFRSF25Q93038 417 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 MSLNLQ96KJ4 702 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 CEP170P1Q96L14 293 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 NLRP4Q96MN2 994 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 CLEC1BQ9P126 229 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 LZTS1Q9Y250 596 aa23.32■■□□□ 1.32
CLDND1-216ENST00000507944 FSCN2O14926 492 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 PER2O15055 1255 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 ATF7P17544 494 aaPredicted RBP23.31■■□□□ 1.32
CLDND1-216ENST00000507944 NCAPH2Q6IBW4 605 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 C4orf19Q8IY42 314 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 EXOC8Q8IYI6 725 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 HELQQ8TDG4 1101 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 SLC7A3Q8WY07 619 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 ZNF558Q96NG5 402 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 LXNQ9BS40 222 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 C11orf16Q9NQ32 467 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 RGL1Q9NZL6 768 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 PPME1Q9Y570 386 aa23.31■■□□□ 1.32
CLDND1-216ENST00000507944 EYA4O95677 639 aa23.3■■□□□ 1.32
CLDND1-216ENST00000507944 ALADP13716 330 aa23.3■■□□□ 1.32
CLDND1-216ENST00000507944 PHKA2P46019 1235 aa23.3■■□□□ 1.32
CLDND1-216ENST00000507944 POLGP54098 1239 aaPredicted RBP23.3■■□□□ 1.32
CLDND1-216ENST00000507944 SPIRE1Q08AE8 756 aa23.3■■□□□ 1.32
CLDND1-216ENST00000507944 TWF2Q6IBS0 349 aaKnown RBP23.3■■□□□ 1.32
CLDND1-216ENST00000507944 OTUD6AQ7L8S5 288 aa23.3■■□□□ 1.32
CLDND1-216ENST00000507944 DYDC2Q96IM9 177 aa23.3■■□□□ 1.32
CLDND1-216ENST00000507944 TRAIPQ9BWF2 469 aa23.3■■□□□ 1.32
CLDND1-216ENST00000507944 DHX33Q9H6R0 707 aaKnown RBP23.3■■□□□ 1.32
CLDND1-216ENST00000507944 FAM86C2PA6NEL3 165 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 JAK2O60674 1132 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 SEC24BO95487 1268 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 GLP2RO95838 553 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 YWHABP31946 246 aaKnown RBP23.29■■□□□ 1.32
CLDND1-216ENST00000507944 PPM1AP35813 382 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 PBX3P40426 434 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 RFC5P40937 340 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 KRT17Q04695 432 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 COASYQ13057 564 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 CTTNQ14247 550 aaKnown RBP23.29■■□□□ 1.32
CLDND1-216ENST00000507944 CATSPER4Q7RTX7 472 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 CDCA3Q99618 268 aaPredicted RBP23.29■■□□□ 1.32
CLDND1-216ENST00000507944 ZSWIM4Q9H7M6 989 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 IFT122Q9HBG6 1241 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 SPG21Q9NZD8 308 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 BARX2Q9UMQ3 279 aaPredicted RBP23.29■■□□□ 1.32
CLDND1-216ENST00000507944 PIN4Q9Y237 131 aaKnown RBP23.29■■□□□ 1.32
CLDND1-216ENST00000507944 COL4A3BPQ9Y5P4 624 aa23.29■■□□□ 1.32
CLDND1-216ENST00000507944 BTBD18B2RXH4 712 aa23.28■■□□□ 1.32
CLDND1-216ENST00000507944 SKIP12755 728 aa23.28■■□□□ 1.32
CLDND1-216ENST00000507944 TRIM29Q14134 588 aa23.28■■□□□ 1.32
CLDND1-216ENST00000507944 DUSP6Q16828 381 aa23.28■■□□□ 1.32
CLDND1-216ENST00000507944 PLPP4Q5VZY2 271 aa23.28■■□□□ 1.32
CLDND1-216ENST00000507944 TPH2Q8IWU9 490 aa23.28■■□□□ 1.32
CLDND1-216ENST00000507944 SMRP1Q8NCR6 262 aa23.28■■□□□ 1.32
CLDND1-216ENST00000507944 PRPF31Q8WWY3 499 aaKnown RBP23.28■■□□□ 1.32
CLDND1-216ENST00000507944 TMEM143Q96AN5 459 aa23.28■■□□□ 1.32
CLDND1-216ENST00000507944 POP1Q99575 1024 aaKnown RBP23.28■■□□□ 1.32
CLDND1-216ENST00000507944 TCF25Q9BQ70 676 aa23.28■■□□□ 1.32
CLDND1-216ENST00000507944 MRPL9Q9BYD2 267 aaKnown RBP23.28■■□□□ 1.32
CLDND1-216ENST00000507944 FSD2A1L4K1 749 aa23.27■■□□□ 1.32
CLDND1-216ENST00000507944 ZBTB39O15060 712 aa23.27■■□□□ 1.32
CLDND1-216ENST00000507944 SRGAP2CP0DJJ0 459 aa23.27■■□□□ 1.32
CLDND1-216ENST00000507944 FOSBP53539 338 aa23.27■■□□□ 1.32
CLDND1-216ENST00000507944 CYP4A11Q02928 519 aa23.27■■□□□ 1.32
CLDND1-216ENST00000507944 XKR9Q5GH70 373 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms