RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 FAM204AQ9H8W3 233 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 TRPC7Q9HCX4 862 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 PEX10O60683 326 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 ABCB4P21439 1286 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 SREBF1P36956 1147 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 TAF2Q6P1X5 1199 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 UBE2TQ9NPD8 197 aaPredicted RBP10.23□□□□□ -0.77
NEK1-203ENST00000507142 KLK14Q9P0G3 267 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 CPSF3Q9UKF6 684 aaKnown RBP10.23□□□□□ -0.77
NEK1-203ENST00000507142 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 A0A1W2PRG0 241 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 LRRN2O75325 713 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 HOXC6P09630 235 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 ARL1P40616 181 aaPredicted RBP10.23□□□□□ -0.77
NEK1-203ENST00000507142 FAM193AP78312 1265 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 SEC23AQ15436 765 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 C7orf43Q8WVR3 580 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 IL25Q9H293 177 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 AGO4Q9HCK5 861 aaKnown RBP10.23□□□□□ -0.77
NEK1-203ENST00000507142 A8MXQ7 604 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 GOLGA8SH3BPF8 625 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 INTS8Q75QN2 995 aaKnown RBP10.23□□□□□ -0.77
NEK1-203ENST00000507142 CDR2LQ86X02 465 aaPredicted RBP10.23□□□□□ -0.77
NEK1-203ENST00000507142 SPATA2LQ8IUW3 424 aaPredicted RBP10.23□□□□□ -0.77
NEK1-203ENST00000507142 FAM81BQ96LP2 452 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 ANKEF1Q9NU02 776 aa10.23□□□□□ -0.77
NEK1-203ENST00000507142 ALS2Q96Q42 1657 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 CCDC175P0C221 793 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 GPD1LQ8N335 351 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 ZNF296Q8WUU4 475 aaPredicted RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 NUCKS1Q9H1E3 243 aaKnown RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 RCOR1Q9UKL0 485 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 GAS2O43903 313 aaKnown RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 CUL4BQ13620 913 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 CHAMP1Q96JM3 812 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 UBE2OQ9C0C9 1292 aaKnown RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 IKBKGQ9Y6K9 419 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 URODP06132 367 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 DNAJB2P25686 324 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 NMT1P30419 496 aaKnown RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 TYW1BQ6NUM6 668 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 PURBQ96QR8 312 aaKnown RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 SEPT5Q99719 369 aaPredicted RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 SRRDQ9UH36 339 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 DDX20Q9UHI6 824 aaKnown RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 RNF8O76064 485 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 LRG1P02750 347 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 GRIK1P39086 918 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 ATP2C1P98194 919 aaPredicted RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 PKN2Q16513 984 aaKnown RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 HADHQ16836 314 aaKnown RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 NOL9Q5SY16 702 aaKnown RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 RNF219Q5W0B1 726 aaPredicted RBP10.22□□□□□ -0.77
NEK1-203ENST00000507142 CCDC186Q7Z3E2 898 aa10.22□□□□□ -0.77
NEK1-203ENST00000507142 UNCXA6NJT0 531 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 KIF2AO00139 706 aaPredicted RBP10.21□□□□□ -0.77
NEK1-203ENST00000507142 PSMC6P62333 389 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 TMEM132DQ14C87 1099 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 SH3BP5LQ7L8J4 393 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 NME8Q8N427 588 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 PRPF31Q8WWY3 499 aaKnown RBP10.21□□□□□ -0.77
NEK1-203ENST00000507142 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.21□□□□□ -0.77
NEK1-203ENST00000507142 AGAP1Q9UPQ3 857 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 SMIM22K7EJ46 135 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 NR3C1P04150 777 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 PLS3P13797 630 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 DUOXA2Q1HG44 320 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 ATP8B4Q8TF62 1192 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 GCNT4Q9P109 453 aa10.21□□□□□ -0.77
NEK1-203ENST00000507142 C4BP0C0L5 1744 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 A6NJR5 290 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 LGALS2P05162 132 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 SKILP12757 684 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 ADORA2BP29275 332 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 GCLMP48507 274 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 ACOT2P49753 483 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 SPATA1Q5VX52 437 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 PPP4R3CPQ6ZMV5 832 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 REPS2Q8NFH8 660 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 GAS2L1Q99501 681 aaPredicted RBP10.21□□□□□ -0.78
NEK1-203ENST00000507142 RASAL2Q9UJF2 1139 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 ERLIN1O75477 346 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 CCL5P13501 91 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 PDZD4Q76G19 769 aaPredicted RBP10.21□□□□□ -0.78
NEK1-203ENST00000507142 TUBGCP2Q9BSJ2 902 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 HIPK3Q9H422 1215 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 ODF2LQ9ULJ1 636 aa10.21□□□□□ -0.78
NEK1-203ENST00000507142 SLC10A3P09131 477 aa10.2□□□□□ -0.78
NEK1-203ENST00000507142 CCNE1P24864 410 aa10.2□□□□□ -0.78
NEK1-203ENST00000507142 CCDC122Q5T0U0 273 aa10.2□□□□□ -0.78
NEK1-203ENST00000507142 LMBRD2Q68DH5 695 aaPredicted RBP10.2□□□□□ -0.78
NEK1-203ENST00000507142 LBX2Q6XYB7 198 aa10.2□□□□□ -0.78
NEK1-203ENST00000507142 EXOC4Q96A65 974 aa10.2□□□□□ -0.78
NEK1-203ENST00000507142 PPP1R9BQ96SB3 815 aa10.2□□□□□ -0.78
NEK1-203ENST00000507142 TRPV2Q9Y5S1 764 aa10.2□□□□□ -0.78
NEK1-203ENST00000507142 SLC4A7Q9Y6M7 1214 aa10.2□□□□□ -0.78
NEK1-203ENST00000507142 MGAT5BQ3V5L5 792 aa10.2□□□□□ -0.78
NEK1-203ENST00000507142 UBL4BQ8N7F7 174 aa10.2□□□□□ -0.78
NEK1-203ENST00000507142 APPL2Q8NEU8 664 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms