RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 FGFR4P22455 802 aa21.46■■□□□ 1.03
LMNA-221ENST00000506981 SARSP49591 514 aaKnown RBP21.46■■□□□ 1.03
LMNA-221ENST00000506981 HTRA4P83105 476 aaPredicted RBP21.46■■□□□ 1.03
LMNA-221ENST00000506981 FAM102BQ5T8I3 360 aa21.46■■□□□ 1.03
LMNA-221ENST00000506981 SLC24A5Q71RS6 500 aa21.46■■□□□ 1.03
LMNA-221ENST00000506981 MAEAQ7L5Y9 396 aa21.46■■□□□ 1.03
LMNA-221ENST00000506981 CATSPER4Q7RTX7 472 aa21.46■■□□□ 1.03
LMNA-221ENST00000506981 KCTD17Q8N5Z5 321 aa21.46■■□□□ 1.03
LMNA-221ENST00000506981 MMTAG2Q9BU76 263 aaKnown RBP21.46■■□□□ 1.03
LMNA-221ENST00000506981 RGS18Q9NS28 235 aa21.46■■□□□ 1.03
LMNA-221ENST00000506981 DACT1Q9NYF0 836 aa21.46■■□□□ 1.03
LMNA-221ENST00000506981 MGEA5O60502 916 aa21.45■■□□□ 1.02
LMNA-221ENST00000506981 CSDE1O75534 798 aaKnown RBP21.45■■□□□ 1.02
LMNA-221ENST00000506981 SLC34A2O95436 690 aa21.45■■□□□ 1.02
LMNA-221ENST00000506981 F13A1P00488 732 aa21.45■■□□□ 1.02
LMNA-221ENST00000506981 CYP11B2P19099 503 aa21.45■■□□□ 1.02
LMNA-221ENST00000506981 PTPAQ15257 358 aa21.45■■□□□ 1.02
LMNA-221ENST00000506981 RTN4RL1Q86UN2 441 aaPredicted RBP21.45■■□□□ 1.02
LMNA-221ENST00000506981 USP28Q96RU2 1077 aa21.45■■□□□ 1.02
LMNA-221ENST00000506981 PCDHB7Q9Y5E2 793 aa21.45■■□□□ 1.02
LMNA-221ENST00000506981 LCHNA4D1U4 455 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 E9PMD0 336 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 ERLIN2O94905 339 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 MARCKSP29966 332 aaPredicted RBP21.44■■□□□ 1.02
LMNA-221ENST00000506981 ARL2P36404 184 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 TAP1Q03518 808 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 GRIN2CQ14957 1233 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 STK38Q15208 465 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 HYIQ5T013 277 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 ASAP3Q8TDY4 903 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 GUCD1Q96NT3 240 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 GAS2L1Q99501 681 aaPredicted RBP21.44■■□□□ 1.02
LMNA-221ENST00000506981 IFT122Q9HBG6 1241 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 CHST12Q9NRB3 414 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 TCHHQ07283 1943 aa21.44■■□□□ 1.02
LMNA-221ENST00000506981 SSBP05455 408 aaKnown RBP eCLIP21.43■■□□□ 1.02
LMNA-221ENST00000506981 GLRA2P23416 452 aa21.43■■□□□ 1.02
LMNA-221ENST00000506981 TXLNAP40222 546 aa21.43■■□□□ 1.02
LMNA-221ENST00000506981 CAPSQ13938 189 aa21.43■■□□□ 1.02
LMNA-221ENST00000506981 DSC3Q14574 896 aa21.43■■□□□ 1.02
LMNA-221ENST00000506981 PLIN2Q99541 437 aa21.43■■□□□ 1.02
LMNA-221ENST00000506981 CDX2Q99626 313 aaPredicted RBP21.43■■□□□ 1.02
LMNA-221ENST00000506981 PRDM12Q9H4Q4 367 aa21.43■■□□□ 1.02
LMNA-221ENST00000506981 GPRC5CQ9NQ84 441 aa21.43■■□□□ 1.02
LMNA-221ENST00000506981 PIN4Q9Y237 131 aaKnown RBP21.43■■□□□ 1.02
LMNA-221ENST00000506981 ADGRA3Q8IWK6 1321 aa21.43■■□□□ 1.02
LMNA-221ENST00000506981 SZT2Q5T011 3432 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 LINC01553A4QN01 128 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 LRRIQ4A6NIV6 560 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 C9IYK1 514 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 FOSL2P15408 326 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 PTENP60484 403 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 POU5F1BQ06416 359 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 NCBP1Q09161 790 aaKnown RBP21.42■■□□□ 1.02
LMNA-221ENST00000506981 GRB10Q13322 594 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 SLC39A14Q15043 492 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 PPP2R5AQ15172 486 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 PCBP1Q15365 356 aaKnown RBP eCLIP21.42■■□□□ 1.02
LMNA-221ENST00000506981 TWF2Q6IBS0 349 aaKnown RBP21.42■■□□□ 1.02
LMNA-221ENST00000506981 ZBTB8OSQ8IWT0 167 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 FIBCD1Q8N539 461 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 SP7Q8TDD2 431 aaPredicted RBP21.42■■□□□ 1.02
LMNA-221ENST00000506981 MYLIPQ8WY64 445 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 ARNTL2Q8WYA1 636 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 KIFAP3Q92845 792 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 IFT74Q96LB3 600 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 PNMA5Q96PV4 448 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 TGS1Q96RS0 853 aaKnown RBP21.42■■□□□ 1.02
LMNA-221ENST00000506981 CERS4Q9HA82 394 aa21.42■■□□□ 1.02
LMNA-221ENST00000506981 SRPRBQ9Y5M8 271 aaKnown RBP21.42■■□□□ 1.02
LMNA-221ENST00000506981 INO80B-WBP1J3KQ70 363 aa21.41■■□□□ 1.02
LMNA-221ENST00000506981 DGKIO75912 1065 aa21.41■■□□□ 1.02
LMNA-221ENST00000506981 NASPP49321 788 aaPredicted RBP21.41■■□□□ 1.02
LMNA-221ENST00000506981 GRIN1Q05586 938 aa21.41■■□□□ 1.02
LMNA-221ENST00000506981 BTG3Q14201 252 aaPredicted RBP21.41■■□□□ 1.02
LMNA-221ENST00000506981 TMEM119Q4V9L6 283 aa21.41■■□□□ 1.02
LMNA-221ENST00000506981 KRI1Q8N9T8 703 aaKnown RBP21.41■■□□□ 1.02
LMNA-221ENST00000506981 SAMD11Q96NU1 681 aa21.41■■□□□ 1.02
LMNA-221ENST00000506981 CSRNP2Q9H175 543 aa21.41■■□□□ 1.02
LMNA-221ENST00000506981 C2orf40Q9H1Z8 148 aa21.41■■□□□ 1.02
LMNA-221ENST00000506981 ELAC1Q9H777 363 aaKnown RBP21.41■■□□□ 1.02
LMNA-221ENST00000506981 TMEM161AQ9NX61 479 aa21.41■■□□□ 1.02
LMNA-221ENST00000506981 FBXO2Q9UK22 296 aaPredicted RBP21.41■■□□□ 1.02
LMNA-221ENST00000506981 STXBP5LQ9Y2K9 1186 aa21.41■■□□□ 1.02
LMNA-221ENST00000506981 MORC2Q9Y6X9 1032 aaPredicted RBP21.41■■□□□ 1.02
LMNA-221ENST00000506981 HOXA2O43364 376 aa21.4■■□□□ 1.02
LMNA-221ENST00000506981 ARHGEF15O94989 841 aa21.4■■□□□ 1.02
LMNA-221ENST00000506981 SKIP12755 728 aa21.4■■□□□ 1.02
LMNA-221ENST00000506981 KCNK18Q7Z418 384 aa21.4■■□□□ 1.02
LMNA-221ENST00000506981 IFNLR1Q8IU57 520 aaPredicted RBP21.4■■□□□ 1.02
LMNA-221ENST00000506981 CMTR2Q8IYT2 770 aaKnown RBP21.4■■□□□ 1.02
LMNA-221ENST00000506981 TIPINQ9BVW5 301 aa21.4■■□□□ 1.02
LMNA-221ENST00000506981 NFKBIZQ9BYH8 718 aa21.4■■□□□ 1.02
LMNA-221ENST00000506981 MINDY3Q9H8M7 445 aa21.4■■□□□ 1.02
LMNA-221ENST00000506981 AGPAT5Q9NUQ2 364 aa21.4■■□□□ 1.02
LMNA-221ENST00000506981 CCDC39Q9UFE4 941 aa21.4■■□□□ 1.02
LMNA-221ENST00000506981 MTUS1Q9ULD2 1270 aa21.4■■□□□ 1.02
LMNA-221ENST00000506981 YEATS4O95619 227 aa21.39■■□□□ 1.01
LMNA-221ENST00000506981 NAMPTP43490 491 aa21.39■■□□□ 1.01
LMNA-221ENST00000506981 RAB27AP51159 221 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms