RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 POLR3FQ9H1D9 316 aaPredicted RBP10.79□□□□□ -0.68
SFXN1-205ENST00000506963 AGO3Q9H9G7 860 aaKnown RBP10.79□□□□□ -0.68
SFXN1-205ENST00000506963 MAGEF1Q9HAY2 307 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 IFT122Q9HBG6 1241 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 KBTBD4Q9NVX7 518 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 USP25Q9UHP3 1055 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 KCNG1Q9UIX4 513 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 KCNH3Q9ULD8 1083 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 ODF2LQ9ULJ1 636 aa10.79□□□□□ -0.68
SFXN1-205ENST00000506963 MYH11P35749 1972 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 A0A087WZ62 844 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 GPR182O15218 404 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 GHRP10912 638 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 ACTN1P12814 892 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 CAPSQ13938 189 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 MCM6Q14566 821 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 CSPP1Q1MSJ5 1256 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 CDCA2Q69YH5 1023 aaPredicted RBP10.78□□□□□ -0.68
SFXN1-205ENST00000506963 DEFB128Q7Z7B8 93 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 GPBP1Q86WP2 473 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 KSR1Q8IVT5 923 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 DBF4BQ8NFT6 615 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 NLRP7Q8WX94 980 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 OSMRQ99650 979 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 FDXACB1Q9BRP7 624 aaPredicted RBP10.78□□□□□ -0.68
SFXN1-205ENST00000506963 NTPCRQ9BSD7 190 aaKnown RBP10.78□□□□□ -0.68
SFXN1-205ENST00000506963 FTHL17Q9BXU8 183 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 IFIH1Q9BYX4 1025 aaKnown RBP10.78□□□□□ -0.68
SFXN1-205ENST00000506963 TNMDQ9H2S6 317 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 GDPD2Q9HCC8 539 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 ERVK-5Q9HDB9 667 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 GPRC5CQ9NQ84 441 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 BMP2KQ9NSY1 1161 aaPredicted RBP10.78□□□□□ -0.68
SFXN1-205ENST00000506963 PCDH10Q9P2E7 1040 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 PADI3Q9ULW8 664 aa10.78□□□□□ -0.68
SFXN1-205ENST00000506963 NOC2LQ9Y3T9 749 aaKnown RBP10.78□□□□□ -0.68
SFXN1-205ENST00000506963 TTC3P53804 2025 aa10.77□□□□□ -0.68
SFXN1-205ENST00000506963 HIP1RO75146 1068 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 RPS6KA5O75582 802 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 ACRP10323 421 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 PFKFB1P16118 471 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 SCP2P22307 547 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 SFPQP23246 707 aaKnown RBP eCLIP10.77□□□□□ -0.69
SFXN1-205ENST00000506963 CD52P31358 61 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 PHKA2P46019 1235 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 PAK2Q13177 524 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 GIT2Q14161 759 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 IKBKEQ14164 716 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 SHHQ15465 462 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 TCTN1Q2MV58 587 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 C9orf50Q5SZB4 431 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 FAM102BQ5T8I3 360 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 SV2BQ7L1I2 683 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 FAM228AQ86W67 206 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 TDHQ8IZJ6 230 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 PDILTQ8N807 584 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 RNF149Q8NC42 400 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 SPIRE2Q8WWL2 714 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 BSNDQ8WZ55 320 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 MRPS27Q92552 414 aaKnown RBP10.77□□□□□ -0.69
SFXN1-205ENST00000506963 NLRP4Q96MN2 994 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 TRAIPQ9BWF2 469 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 LRRC27Q9C0I9 530 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 MTIF3Q9H2K0 278 aaKnown RBP10.77□□□□□ -0.69
SFXN1-205ENST00000506963 CHST12Q9NRB3 414 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 PHLPP2Q6ZVD8 1323 aa10.77□□□□□ -0.69
SFXN1-205ENST00000506963 FRMD3A2A2Y4 597 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 POLR2DO15514 142 aaKnown RBP10.76□□□□□ -0.69
SFXN1-205ENST00000506963 SSBP05455 408 aaKnown RBP eCLIP10.76□□□□□ -0.69
SFXN1-205ENST00000506963 SLFN14P0C7P3 912 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 SRGAP2CP0DJJ0 459 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 PLS3P13797 630 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 EFNA5P52803 228 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 AMPD3Q01432 767 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 MBTD1Q05BQ5 628 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 DMP1Q13316 513 aaPredicted RBP10.76□□□□□ -0.69
SFXN1-205ENST00000506963 DSC3Q14574 896 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 FAM187BQ17R55 369 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 PHOSPHO2Q8TCD6 241 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 DHX58Q96C10 678 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 DNAJC19Q96DA6 116 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 IFT74Q96LB3 600 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 PRIMPOLQ96LW4 560 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 REEP2Q9BRK0 252 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 PANK2Q9BZ23 570 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 C2orf40Q9H1Z8 148 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 TSPYL2Q9H2G4 693 aaPredicted RBP10.76□□□□□ -0.69
SFXN1-205ENST00000506963 TMX1Q9H3N1 280 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 FZD8Q9H461 694 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 MINDY3Q9H8M7 445 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 LARSQ9P2J5 1176 aaKnown RBP10.76□□□□□ -0.69
SFXN1-205ENST00000506963 ARHGAP28Q9P2N2 729 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 ST3GAL5Q9UNP4 418 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 COLQQ9Y215 455 aaPredicted RBP10.76□□□□□ -0.69
SFXN1-205ENST00000506963 GINS2Q9Y248 185 aa10.76□□□□□ -0.69
SFXN1-205ENST00000506963 A0A1B0GVL5 298 aa10.75□□□□□ -0.69
SFXN1-205ENST00000506963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.75□□□□□ -0.69
SFXN1-205ENST00000506963 MYMKA6NI61 221 aa10.75□□□□□ -0.69
SFXN1-205ENST00000506963 ACTN4O43707 911 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms