RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 PI16Q6UXB8 463 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 YTHDF3Q7Z739 585 aaKnown RBP6.45□□□□□ -1.38
CLDND1-213ENST00000506927 CABP7Q86V35 215 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 MAP4K3Q8IVH8 894 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 SUGP1Q8IWZ8 645 aaKnown RBP6.45□□□□□ -1.38
CLDND1-213ENST00000506927 GALNT12Q8IXK2 581 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 GRAMD1CQ8IYS0 662 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 GALNT11Q8NCW6 608 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 ACRBPQ8NEB7 543 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 WDR66Q8TBY9 1149 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 RRP36Q96EU6 259 aaKnown RBP6.45□□□□□ -1.38
CLDND1-213ENST00000506927 PNKPQ96T60 521 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 NAP1L3Q99457 506 aaPredicted RBP6.45□□□□□ -1.38
CLDND1-213ENST00000506927 NT5C3AQ9H0P0 336 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 SRA1Q9HD15 236 aaKnown RBP6.45□□□□□ -1.38
CLDND1-213ENST00000506927 ZCCHC17Q9NP64 241 aaKnown RBP6.45□□□□□ -1.38
CLDND1-213ENST00000506927 ST7Q9NRC1 585 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 BARHL2Q9NY43 387 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 SWAP70Q9UH65 585 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 DCTN4Q9UJW0 460 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 HPCAL4Q9UM19 191 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 DIS3Q9Y2L1 958 aaKnown RBP6.45□□□□□ -1.38
CLDND1-213ENST00000506927 PCDHA13Q9Y5I0 950 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 XDHP47989 1333 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 KDM3AQ9Y4C1 1321 aa6.45□□□□□ -1.38
CLDND1-213ENST00000506927 DUOX1Q9NRD9 1551 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 LAMB2P55268 1798 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 ESYT2A0FGR8 921 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 BTNL10A8MVZ5 291 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 H3BQF6 201 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 CCDC188H7C350 402 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 FSCN2O14926 492 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 CPNE3O75131 537 aaKnown RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 GFPT2O94808 682 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 SERPING1P05155 500 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 TSPY3P0CV98 308 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 TSPY8P0CW00 308 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 GCFC2P16383 781 aaKnown RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 MAPK1P28482 360 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 HIBADHP31937 336 aaKnown RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 RDXP35241 583 aaKnown RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 MAGEA1P43355 309 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 NAP1L1P55209 391 aaKnown RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 ASIC1P78348 528 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 FKBP3Q00688 224 aaKnown RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 LMNB2Q03252 620 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 GOLGA8FQ08AF8 430 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 GOLGA8DPQ0D2H9 430 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 TRAF1Q13077 416 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 GRM4Q14833 912 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 PLCB4Q15147 1175 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 HLFQ16534 295 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 SPDYCQ5MJ68 293 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 EMC10Q5UCC4 262 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 KRT79Q5XKE5 535 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 TTI2Q6NXR4 508 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 LRIG3Q6UXM1 1119 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 MMS22LQ6ZRQ5 1243 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 UNC13DQ70J99 1090 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 TMC7Q7Z402 723 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 NEK8Q86SG6 692 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 TADA2BQ86TJ2 420 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 DZIP1Q86YF9 867 aaKnown RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 CD302Q8IX05 232 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 SYCE1Q8N0S2 351 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 GUF1Q8N442 669 aaKnown RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 MREGQ8N565 214 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 OTUD6BQ8N6M0 293 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 MIGA1Q8NAN2 632 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 CCDC26Q8TAB7 109 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 PBKQ96KB5 322 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 CNOT6LQ96LI5 555 aaKnown RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 DMRTB1Q96MA1 342 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 RIOK1Q9BRS2 568 aaKnown RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 SPZ1Q9BXG8 430 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 STMN4Q9H169 189 aaPredicted RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 ACTR5Q9H9F9 607 aaPredicted RBP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 ASAP1Q9ULH1 1129 aa6.44□□□□□ -1.38
CLDND1-213ENST00000506927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.44□□□□□ -1.38
CLDND1-213ENST00000506927 MYH8P13535 1937 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 A0A1W2PP55 124 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 TMCO5BA8MYB1 307 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 B4DLN1 442 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 H0YHG0 523 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 H3BRJ5 948 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 EIF1AYO14602 144 aaKnown RBP6.43□□□□□ -1.38
CLDND1-213ENST00000506927 TM4SF5O14894 197 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 EIF3HO15372 352 aaKnown RBP eCLIP6.43□□□□□ -1.38
CLDND1-213ENST00000506927 MARCH6O60337 910 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 FURINP09958 794 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 GRIN1Q05586 938 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 IFFO1Q0D2I5 559 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 BIRC3Q13489 604 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 SLC10A5Q5PT55 438 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 SFMBT2Q5VUG0 894 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 NCAPH2Q6IBW4 605 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 PPP4R3AQ6IN85 833 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 CENPPQ6IPU0 288 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 FAM117BQ6P1L5 589 aa6.43□□□□□ -1.38
CLDND1-213ENST00000506927 LRRC31Q6UY01 552 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms