RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SLC44A5Q8NCS7 719 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 ZBTB10Q96DT7 871 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 YIPF3Q9GZM5 350 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 NT5C3AQ9H0P0 336 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 VAT1LQ9HCJ6 419 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 PCYOX1Q9UHG3 505 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 TRIM33Q9UPN9 1127 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 E9PMD0 336 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 PODXLO00592 558 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 XRCC5P13010 732 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 RASA1P20936 1047 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 CHRNA3P32297 505 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 CACNB1Q02641 598 aaPredicted RBP18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 NUGGCQ68CJ6 796 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 ALG3Q92685 438 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 LRRC42Q9Y546 428 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 KDM3AQ9Y4C1 1321 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 hCG_1984214I3L0E3 225 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 AHCYL1O43865 530 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 PLA2G4BP0C869 781 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 GNAZP19086 355 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 PDE6BP35913 854 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 ZNF568Q3ZCX4 644 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 ZNF713Q8N859 430 aaPredicted RBP18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 MARCH10Q8NA82 808 aaPredicted RBP18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 FAM167BQ9BTA0 163 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 OSBPL1AQ9BXW6 950 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 RTCBQ9Y3I0 505 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 SPATA31A5Q5VU36 1347 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 SPATA31A7Q8IWB4 1347 aa18.45■□□□□ 0.54
SQSTM1-211ENST00000506690 TMEM120BA0PK00 339 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 CAMTA2O94983 1202 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 SNUPNO95149 360 aaKnown RBP18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 PECAM1P16284 738 aaPredicted RBP18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 CYP11B2P19099 503 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 ATP4AP20648 1035 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 RWDD2BP57060 319 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 GJB7Q6PEY0 223 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 VSTM1Q6UX27 236 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 GPBP1Q86WP2 473 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 ETAA1Q9NY74 926 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 KRT13P13646 458 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 LMNB1P20700 586 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 ADCY7P51828 1080 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 CASP5P51878 434 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 RBBP5Q15291 538 aaKnown RBP18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 THEMIS2Q5TEJ8 643 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 PRELID2Q8N945 189 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 CKAP2Q8WWK9 683 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 RMDN2Q96LZ7 410 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 RUNDC3BQ96NL0 473 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 RIOX1Q9H6W3 641 aa18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 NIP7Q9Y221 180 aaKnown RBP eCLIP18.44■□□□□ 0.54
SQSTM1-211ENST00000506690 UNC5CO95185 931 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 ALAS1P13196 640 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 HSPA6P17066 643 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 CCDC15Q0P6D6 951 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 RNF43Q68DV7 783 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 GLYCTKQ8IVS8 523 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 ANKLE1Q8NAG6 615 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 MGARPQ8TDB4 240 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 CTNNBL1Q8WYA6 563 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 UTP4Q969X6 686 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 SYT11Q9BT88 431 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 TRIM7Q9C029 511 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 GCNT4Q9P109 453 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 KIAA1024Q9UPX6 916 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 AKAP3O75969 853 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 CTNNA2P26232 953 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 HOXD13P35453 343 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 STAT1P42224 750 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 MGAT5Q09328 741 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 DCAF17Q5H9S7 520 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 TTC27Q6P3X3 843 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 ARHGEF2Q92974 986 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 ART4Q93070 314 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 GJA10Q969M2 543 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 SLC35C1Q96A29 364 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 PFASO15067 1338 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 SYNGAP1Q96PV0 1343 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 PITPNM2Q9BZ72 1349 aa18.43■□□□□ 0.54
SQSTM1-211ENST00000506690 GTPBP10A4D1E9 387 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 CREB1P16220 341 aa18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 KNOP1Q1ED39 458 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 NBPF20Q3BBV1 942 aa18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 CMPK2Q5EBM0 449 aa18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 ARSHQ5FYA8 562 aa18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 CGB2Q6NT52 195 aa18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 INTS5Q6P9B9 1019 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 KCNV2Q8TDN2 545 aa18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 ARHGEF26Q96DR7 871 aa18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 RAB3IPQ96QF0 476 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 NKX1-2Q9UD57 310 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 DDX25Q9UHL0 483 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 PCDHA12Q9UN75 941 aa18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 E7ENQ6 273 aa18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 ABLIM1O14639 778 aa18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 HIP1RO75146 1068 aa18.42■□□□□ 0.54
SQSTM1-211ENST00000506690 PLCG2P16885 1265 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms