RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 TCF7P36402 384 aaPredicted RBP12.53□□□□□ -0.4
ITGA3-208ENST00000506437 PPP2R5CQ13362 524 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 ACVR2BQ13705 512 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 OLFML2BQ68BL8 750 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 GPBP1Q86WP2 473 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 DHX40Q8IX18 779 aaKnown RBP12.53□□□□□ -0.4
ITGA3-208ENST00000506437 AFAP1L1Q8TED9 768 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 AFG1LQ8WV93 481 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 DDX12PQ92771 950 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 GPRASP2Q96D09 838 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 AK8Q96MA6 479 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 FAM210AQ96ND0 272 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 PAIP2Q9BPZ3 127 aaKnown RBP12.53□□□□□ -0.4
ITGA3-208ENST00000506437 SLC39A2Q9NP94 309 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 MAN1B1Q9UKM7 699 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 ZNF232Q9UNY5 417 aa12.53□□□□□ -0.4
ITGA3-208ENST00000506437 TBX3O15119 743 aa12.52□□□□□ -0.4
ITGA3-208ENST00000506437 USO1O60763 962 aaKnown RBP12.52□□□□□ -0.4
ITGA3-208ENST00000506437 KRT18P05783 430 aaKnown RBP12.52□□□□□ -0.4
ITGA3-208ENST00000506437 FNTAP49354 379 aa12.52□□□□□ -0.4
ITGA3-208ENST00000506437 IGBP1P78318 339 aa12.52□□□□□ -0.4
ITGA3-208ENST00000506437 KLHL23Q8NBE8 558 aa12.52□□□□□ -0.4
ITGA3-208ENST00000506437 BCAS4Q8TDM0 211 aa12.52□□□□□ -0.4
ITGA3-208ENST00000506437 GTF3C2Q8WUA4 911 aaPredicted RBP12.52□□□□□ -0.4
ITGA3-208ENST00000506437 RAD54LQ92698 747 aa12.52□□□□□ -0.4
ITGA3-208ENST00000506437 GLG1Q92896 1179 aa12.52□□□□□ -0.4
ITGA3-208ENST00000506437 NAP1L4Q99733 375 aaKnown RBP12.52□□□□□ -0.4
ITGA3-208ENST00000506437 IFNKQ9P0W0 207 aa12.52□□□□□ -0.4
ITGA3-208ENST00000506437 USP20Q9Y2K6 914 aa12.52□□□□□ -0.4
ITGA3-208ENST00000506437 SLC15A5A6NIM6 579 aa12.52□□□□□ -0.41
ITGA3-208ENST00000506437 RPA1P27694 616 aa12.52□□□□□ -0.41
ITGA3-208ENST00000506437 FCGRTP55899 365 aa12.52□□□□□ -0.41
ITGA3-208ENST00000506437 ARSHQ5FYA8 562 aa12.52□□□□□ -0.41
ITGA3-208ENST00000506437 GOLGA1Q92805 767 aa12.52□□□□□ -0.41
ITGA3-208ENST00000506437 ACBD3Q9H3P7 528 aa12.52□□□□□ -0.41
ITGA3-208ENST00000506437 KCND1Q9NSA2 647 aa12.52□□□□□ -0.41
ITGA3-208ENST00000506437 LMCD1Q9NZU5 365 aa12.52□□□□□ -0.41
ITGA3-208ENST00000506437 FAM237AA0A1B0GTK4 181 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 GSTTP1A0A1W2PQM5 241 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 UPP2O95045 317 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 PGK1P00558 417 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 HSPA6P17066 643 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 VSNL1P62760 191 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 MTERF2Q49AM1 385 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 SV2BQ7L1I2 683 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 TRPV1Q8NER1 839 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 SH3TC2Q8TF17 1288 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 RIT2Q99578 217 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 TBC1D22BQ9NU19 505 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 SEPT9Q9UHD8 586 aaPredicted RBP12.51□□□□□ -0.41
ITGA3-208ENST00000506437 DNM3Q9UQ16 869 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 PCDHA10Q9Y5I2 948 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 MRFAP1Q9Y605 127 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 MYH9P35579 1960 aaKnown RBP12.51□□□□□ -0.41
ITGA3-208ENST00000506437 ASB14A6NK59 587 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
ITGA3-208ENST00000506437 ATP4AP20648 1035 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 DPYDQ12882 1025 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 HAUS3Q68CZ6 603 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 B3GNT9Q6UX72 402 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 MAMDC4Q6UXC1 1216 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 ERMNQ8TAM6 284 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 FAM71BQ8TC56 605 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 PCYT2Q99447 389 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 KATNBL1Q9H079 304 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 WDR64B1ANS9 1081 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 CCND3P30281 292 aaPredicted RBP12.51□□□□□ -0.41
ITGA3-208ENST00000506437 GSDMDP57764 484 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 TMEM119Q4V9L6 283 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 CCDC62Q6P9F0 684 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 ANO5Q75V66 913 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 TRIM9Q9C026 710 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 TRIM17Q9Y577 477 aa12.51□□□□□ -0.41
ITGA3-208ENST00000506437 SYNGAP1Q96PV0 1343 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 A0A1B0GUA9 196 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 MYADML2A6NDP7 307 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 GJB1P08034 283 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 RGS2P41220 211 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 STK4Q13043 487 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 MTA1Q13330 715 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 TTLL4Q14679 1199 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 RBBP5Q15291 538 aaKnown RBP12.5□□□□□ -0.41
ITGA3-208ENST00000506437 XKR9Q5GH70 373 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 CEP85LQ5SZL2 805 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 SCLT1Q96NL6 688 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 KIFC3Q9BVG8 833 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 RPN1P04843 607 aaKnown RBP12.5□□□□□ -0.41
ITGA3-208ENST00000506437 YWHABP31946 246 aaKnown RBP12.5□□□□□ -0.41
ITGA3-208ENST00000506437 COPB2P35606 906 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 QARSP47897 775 aaKnown RBP12.5□□□□□ -0.41
ITGA3-208ENST00000506437 PRKCEQ02156 737 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 ORC2Q13416 577 aaPredicted RBP12.5□□□□□ -0.41
ITGA3-208ENST00000506437 BRD3Q15059 726 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 EPHA7Q15375 998 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 SH3RF1Q7Z6J0 888 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 SCFD2Q8WU76 684 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 CCDC43Q96MW1 224 aaKnown RBP12.5□□□□□ -0.41
ITGA3-208ENST00000506437 BEGAINQ9BUH8 593 aa12.5□□□□□ -0.41
ITGA3-208ENST00000506437 FAM107BQ9H098 131 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms