RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 NLRP4Q96MN2 994 aa18.74■□□□□ 0.59
PDLIM7-215ENST00000506161 C11orf84Q9BUA3 381 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-215ENST00000506161 NSUN3Q9H649 340 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-215ENST00000506161 BRMS1Q9HCU9 246 aa18.74■□□□□ 0.59
PDLIM7-215ENST00000506161 TYW1Q9NV66 732 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-215ENST00000506161 TMEM161AQ9NX61 479 aa18.74■□□□□ 0.59
PDLIM7-215ENST00000506161 IL9P15248 144 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 YWHABP31946 246 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 MCM7P33993 719 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 TXKP42681 527 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 NHLH1Q02575 133 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 PTPROQ16827 1216 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 CSPP1Q1MSJ5 1256 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 TIGD5Q53EQ6 642 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 POF1BQ8WVV4 589 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 P2RX5Q93086 422 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 C8orf76Q96K31 380 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 SCLT1Q96NL6 688 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 HSD17B14Q9BPX1 270 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 ELAC1Q9H777 363 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 TTC12Q9H892 705 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 RWDD3Q9Y3V2 267 aa18.73■□□□□ 0.59
PDLIM7-215ENST00000506161 NEMFO60524 1076 aa18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 ALADP13716 330 aa18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 SSTR3P32745 418 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 LONRF3Q496Y0 759 aa18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 TPH2Q8IWU9 490 aa18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 SLFN12Q8IYM2 578 aa18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 COLGALT1Q8NBJ5 622 aa18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 NEK9Q8TD19 979 aa18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 LPPQ93052 612 aa18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 NAP1L4Q99733 375 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 LLPHQ9BRT6 129 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 PLVAPQ9BX97 442 aa18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 ATP6V0A4Q9HBG4 840 aa18.72■□□□□ 0.59
PDLIM7-215ENST00000506161 MARCH6O60337 910 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 TBX10O75333 385 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 SPATA31C1P0DKV0 1188 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 RBM10P98175 930 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 TRIM29Q14134 588 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 EMC2Q15006 297 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 ZNF174Q15697 407 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 XKR9Q5GH70 373 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 ODR4Q5SWX8 454 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 FAM178BQ8IXR5 827 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 RNF169Q8NCN4 708 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 FBXO18Q8NFZ0 1043 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 HELQQ8TDG4 1101 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 PRPF31Q8WWY3 499 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 GCOM2Q9BZD3 368 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 LMAN2LQ9H0V9 348 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 KCNH6Q9H252 994 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 PCDHA12Q9UN75 941 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 COL4A3BPQ9Y5P4 624 aa18.71■□□□□ 0.59
PDLIM7-215ENST00000506161 B4GALT3O60512 393 aa18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 MED24O75448 989 aa18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 BAG4O95429 457 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 POLGP54098 1239 aaPredicted RBP18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 ERVFC1P60507 584 aa18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 CTC1Q2NKJ3 1217 aa18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 LEXMQ3ZCV2 418 aa18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 ZNF410Q86VK4 478 aa18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 PIGOQ8TEQ8 1089 aa18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 PABPC5Q96DU9 382 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 ZSCAN31Q96LW9 406 aaPredicted RBP18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 TMEM117Q9H0C3 514 aa18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 ZSWIM4Q9H7M6 989 aa18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 CLDND1Q9NY35 253 aa18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 TDRD15B5MCY1 1934 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-215ENST00000506161 A0A0U1RQF3 1178 aa18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 EIF5BO60841 1220 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 LYPLA2O95372 231 aa18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 ZSCAN20P17040 1043 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 TOB1P50616 345 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 LAMTOR4Q0VGL1 99 aa18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 CLUL1Q15846 466 aa18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 UBXN11Q5T124 520 aa18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 C4orf32Q8N8J7 132 aa18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 ASAP3Q8TDY4 903 aa18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 IGFLR1Q9H665 355 aa18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 PIN4Q9Y237 131 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-215ENST00000506161 FGF18O76093 207 aa18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 GLP2RO95838 553 aa18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 SRGAP2CP0DJJ0 459 aa18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 HOXA11P31270 313 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 PHKA2P46019 1235 aa18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 DNM2P50570 870 aa18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 AFF1P51825 1210 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 ECM1Q16610 540 aa18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 SPOUT1Q5T280 376 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 EP400NLQ6ZTU2 488 aa18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 FERMT3Q86UX7 667 aa18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 TMEM173Q86WV6 379 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 VN1R2Q8NFZ6 395 aa18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 FBXL18Q96ME1 805 aa18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 SH2B1Q9NRF2 756 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-215ENST00000506161 GRXCR2A6NFK2 248 aa18.67■□□□□ 0.58
PDLIM7-215ENST00000506161 RFC5P40937 340 aa18.67■□□□□ 0.58
PDLIM7-215ENST00000506161 RARRES1P49788 294 aa18.67■□□□□ 0.58
PDLIM7-215ENST00000506161 PTCRAQ6ISU1 281 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms