RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 MED24O75448 989 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 F13A1P00488 732 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 VTNP04004 478 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 CD52P31358 61 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 NASPP49321 788 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-220ENST00000505005 NPEPPSP55786 919 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 HTRA4P83105 476 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-220ENST00000505005 LAMTOR4Q0VGL1 99 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 RESTQ13127 1097 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
NR1I3-220ENST00000505005 MBTPS1Q14703 1052 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 GPNMBQ14956 572 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 PPP2R2DQ66LE6 453 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 CATSPER4Q7RTX7 472 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 CMTR2Q8IYT2 770 aaKnown RBP10.92□□□□□ -0.66
NR1I3-220ENST00000505005 ABI1Q8IZP0 508 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 LRRC71Q8N4P6 559 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 FIBCD1Q8N539 461 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 DEFB123Q8N688 67 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 PIGOQ8TEQ8 1089 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 PPP1R13LQ8WUF5 828 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 SPOCK2Q92563 424 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 OSMRQ99650 979 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 PLVAPQ9BX97 442 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 MRPL9Q9BYD2 267 aaKnown RBP10.92□□□□□ -0.66
NR1I3-220ENST00000505005 SCAND2PQ9GZW5 306 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-220ENST00000505005 TMEM161AQ9NX61 479 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 CXXC1Q9P0U4 656 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-220ENST00000505005 KANSL3Q9P2N6 904 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 ODF2LQ9ULJ1 636 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 NOC2LQ9Y3T9 749 aaKnown RBP10.92□□□□□ -0.66
NR1I3-220ENST00000505005 MICAL3Q7RTP6 2002 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 A0A087WZ62 844 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 A0A0U1RQF3 1178 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 SPTLC2O15270 562 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 DTNBO60941 627 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 ZNF623O75123 536 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 GUCY2CP25092 1073 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 DDIT3P35638 169 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 ARL2P36404 184 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 PTENP60484 403 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 KRT85P78386 507 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 FAM189BP81408 668 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 TMEM62Q0P6H9 643 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 DMP1Q13316 513 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-220ENST00000505005 HSP90AA2PQ14568 343 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-220ENST00000505005 MAPK6Q16659 721 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 PTPROQ16827 1216 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 PLA2G4FQ68DD2 849 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 NOTUMQ6P988 496 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 SYT2Q8N9I0 419 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-220ENST00000505005 RNF149Q8NC42 400 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 DEPTORQ8TB45 409 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 PPP2R3CQ969Q6 453 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 NLRP4Q96MN2 994 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 TGS1Q96RS0 853 aaKnown RBP10.91□□□□□ -0.66
NR1I3-220ENST00000505005 ADAM2Q99965 735 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 FDXACB1Q9BRP7 624 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-220ENST00000505005 ADPGKQ9BRR6 497 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 BHMT2Q9H2M3 363 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 SEMA6BQ9H3T3 888 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 MAGEF1Q9HAY2 307 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 FAM13BQ9NYF5 915 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 TET1Q8NFU7 2136 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 TTC3P53804 2025 aa10.91□□□□□ -0.66
NR1I3-220ENST00000505005 ZMYM2Q9UBW7 1377 aa10.9□□□□□ -0.66
NR1I3-220ENST00000505005 CNTNAP2Q9UHC6 1331 aa10.9□□□□□ -0.66
NR1I3-220ENST00000505005 USO1O60763 962 aaKnown RBP10.9□□□□□ -0.66
NR1I3-220ENST00000505005 CUTAO60888 179 aa10.9□□□□□ -0.66
NR1I3-220ENST00000505005 SRGAP2CP0DJJ0 459 aa10.9□□□□□ -0.66
NR1I3-220ENST00000505005 KYAT1Q16773 422 aa10.9□□□□□ -0.66
NR1I3-220ENST00000505005 FAM187BQ17R55 369 aa10.9□□□□□ -0.66
NR1I3-220ENST00000505005 FAM102BQ5T8I3 360 aa10.9□□□□□ -0.66
NR1I3-220ENST00000505005 TWF2Q6IBS0 349 aaKnown RBP10.9□□□□□ -0.66
NR1I3-220ENST00000505005 POTEGQ6S5H5 508 aa10.9□□□□□ -0.66
NR1I3-220ENST00000505005 FAM228AQ86W67 206 aa10.9□□□□□ -0.66
NR1I3-220ENST00000505005 LINC00301Q8NCQ3 95 aa10.9□□□□□ -0.66
NR1I3-220ENST00000505005 TRIM6Q9C030 488 aaPredicted RBP10.9□□□□□ -0.66
NR1I3-220ENST00000505005 LMAN2LQ9H0V9 348 aa10.9□□□□□ -0.66
NR1I3-220ENST00000505005 AGO3Q9H9G7 860 aaKnown RBP10.9□□□□□ -0.66
NR1I3-220ENST00000505005 COL4A6Q14031 1691 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-220ENST00000505005 C9IYK1 514 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 INO80B-WBP1J3KQ70 363 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 K7ERI5 159 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 WNT7AO00755 349 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 NCK2O43639 380 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 NR1I2O75469 434 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 DGKIO75912 1065 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 KRT18P05783 430 aaKnown RBP10.89□□□□□ -0.67
NR1I3-220ENST00000505005 ERVK-21P61565 698 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 STRN3Q13033 797 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 BTG3Q14201 252 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-220ENST00000505005 NBR1Q14596 966 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 PTPAQ15257 358 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 RRAGBQ5VZM2 374 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 PDE12Q6L8Q7 609 aaKnown RBP10.89□□□□□ -0.67
NR1I3-220ENST00000505005 STXBP4Q6ZWJ1 553 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 SV2BQ7L1I2 683 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 IQUBQ8NA54 791 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms