RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 CLIC5Q9NZA1 410 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 ARHGAP20Q9P2F6 1191 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TSKSQ9UJT2 592 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 DOLKQ9UPQ8 538 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TTLL3Q9Y4R7 772 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TARSL2A2RTX5 802 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 DPPA5A6NC42 116 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TRIM49P0CI25 452 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TRIM49CP0CI26 452 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 MLH1P40692 756 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 DMPKQ09013 629 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 THOC5Q13769 683 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 PTPAQ15257 358 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 ATG4AQ8WYN0 398 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 BTBD6Q96KE9 485 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 ZSCAN10Q96SZ4 725 aaPredicted RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 PYM1Q9BRP8 204 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TCHPQ9BT92 498 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 MOV10L1Q9BXT6 1211 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 FOXP1Q9H334 677 aaPredicted RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 ATP6V0A4Q9HBG4 840 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 ARHGEF10LQ9HCE6 1279 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 GCNT4Q9P109 453 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 HDAC9Q9UKV0 1011 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 PSMD14O00487 310 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 HNRNPRO43390 633 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 GCP02774 474 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 SLC9A1P19634 815 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 KCNJ6P48051 423 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 CLUL1Q15846 466 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 PTF1AQ7RTS3 328 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TRIM74Q86UV6 250 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TRIM73Q86UV7 250 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TTC8Q8TAM2 541 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TBCKQ8TEA7 893 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 DNAJC1Q96KC8 554 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 STOML1Q9UBI4 398 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TSC22D4Q9Y3Q8 395 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 MAD1L1Q9Y6D9 718 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 THSD7BQ9C0I4 1608 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 DDX60Q8IY21 1712 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 SALL3Q9BXA9 1300 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 GOLGA8IPA6NC78 632 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 GOLGA8JA6NMD2 632 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 C6orf229H3BNL8 230 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 NOP56O00567 594 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 ATP6V1G1O75348 118 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TOM1L1O75674 476 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 OR52Z1P0C646 297 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 VEGFAP15692 232 aaPredicted RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 NELFEP18615 380 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 ATP4AP20648 1035 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 EPC2Q52LR7 807 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 ACBD5Q5T8D3 534 aaPredicted RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 ARHGAP22Q7Z5H3 698 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 CCNJLQ8IV13 435 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TMEM60Q9H2L4 133 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 LY9Q9HBG7 655 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 SAYSD1Q9NPB0 183 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 GINM1Q9NU53 330 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TXLNGQ9NUQ3 528 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 CHCHD3Q9NX63 227 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TMEM260Q9NX78 707 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 ARMCX1Q9P291 453 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 CAPN11Q9UMQ6 739 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 RABGAP1Q9Y3P9 1069 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 AK5Q9Y6K8 562 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 PI4K2BG5E9Z4 385 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 PEX1O43933 1283 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 RPS6P62753 249 aaKnown RBP8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 PHEXP78562 749 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 SF3B3Q15393 1217 aaKnown RBP8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 GRAMD4Q6IC98 578 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 KDM7AQ6ZMT4 941 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 MIER3Q7Z3K6 550 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 PASD1Q8IV76 773 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 PALM2Q8IXS6 379 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 REXO1Q8N1G1 1221 aaKnown RBP8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 TRIML2Q8N7C3 387 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 SYT2Q8N9I0 419 aaPredicted RBP8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 TGFBRAP1Q8WUH2 860 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 CNOT8Q9UFF9 292 aaKnown RBP8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 ANAPC5Q9UJX4 755 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 NIP7Q9Y221 180 aaKnown RBP eCLIP8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 REXO2Q9Y3B8 237 aaKnown RBP8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 ANO9A1A5B4 782 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 FAM196BA6NMK8 535 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 KLRF2D3W0D1 207 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 E9PMD0 336 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 CASQ2O14958 399 aaPredicted RBP8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 ATP9AO75110 1047 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 UQCRFS1P1P0C7P4 283 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 PLS3P13797 630 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 PIK3CAP42336 1068 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 PSMC1P62191 440 aaKnown RBP8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 ZNF844Q08AG5 666 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 PRR16Q569H4 304 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 SLC30A10Q6XR72 485 aa8.37□□□□□ -1.07
ATP2C1-208ENST00000504948 TRMT10CQ7L0Y3 403 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms