RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 HTRA4P83105 476 aaPredicted RBP6.6□□□□□ -1.35
SPOP-208ENST00000504889 CEBPZQ03701 1054 aaKnown RBP6.6□□□□□ -1.35
SPOP-208ENST00000504889 RNASELQ05823 741 aaKnown RBP6.6□□□□□ -1.35
SPOP-208ENST00000504889 LAMTOR4Q0VGL1 99 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 ADGRE1Q14246 886 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 MXD4Q14582 209 aaPredicted RBP6.6□□□□□ -1.35
SPOP-208ENST00000504889 TARBP2Q15633 366 aaKnown RBP6.6□□□□□ -1.35
SPOP-208ENST00000504889 BRAPQ7Z569 592 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 SPRED2Q7Z698 418 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 ZBTB8OSQ8IWT0 167 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 TMEM192Q8IY95 271 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 THNSL1Q8IYQ7 743 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 SP7Q8TDD2 431 aaPredicted RBP6.6□□□□□ -1.35
SPOP-208ENST00000504889 MICAL1Q8TDZ2 1067 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 LINC01599Q8WXQ3 324 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 IFT74Q96LB3 600 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 C11orf84Q9BUA3 381 aaPredicted RBP6.6□□□□□ -1.35
SPOP-208ENST00000504889 POLR3FQ9H1D9 316 aaPredicted RBP6.6□□□□□ -1.35
SPOP-208ENST00000504889 ADAMTS10Q9H324 1103 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 TMX1Q9H3N1 280 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 DHX33Q9H6R0 707 aaKnown RBP6.6□□□□□ -1.35
SPOP-208ENST00000504889 DDX19AQ9NUU7 478 aaKnown RBP6.6□□□□□ -1.35
SPOP-208ENST00000504889 TMEM161AQ9NX61 479 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 THEGQ9P2T0 379 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 KIAA1024Q9UPX6 916 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 DNM3Q9UQ16 869 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 INPP5FQ9Y2H2 1132 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 PCDHB12Q9Y5F1 795 aa6.6□□□□□ -1.35
SPOP-208ENST00000504889 COL4A4P53420 1690 aaPredicted RBP6.6□□□□□ -1.35
SPOP-208ENST00000504889 IGKV6-21A0A0C4DH24 114 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 EPOPA6NHQ4 379 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 PP2D1A8MPX8 630 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 STBD1O95210 358 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 SKIP12755 728 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 RPA1P27694 616 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 CDC25AP30304 524 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 TXLNAP40222 546 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 UBA7P41226 1012 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 GATMP50440 423 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 TOB1P50616 345 aaPredicted RBP6.59□□□□□ -1.35
SPOP-208ENST00000504889 MKRN4PQ13434 485 aaPredicted RBP6.59□□□□□ -1.35
SPOP-208ENST00000504889 FOXD4L5Q5VV16 416 aaPredicted RBP6.59□□□□□ -1.35
SPOP-208ENST00000504889 PADI6Q6TGC4 694 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 FAM43BQ6ZT52 329 aaPredicted RBP6.59□□□□□ -1.35
SPOP-208ENST00000504889 SRGAP1Q7Z6B7 1085 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 RTN4RL1Q86UN2 441 aaPredicted RBP6.59□□□□□ -1.35
SPOP-208ENST00000504889 CMTR2Q8IYT2 770 aaKnown RBP6.59□□□□□ -1.35
SPOP-208ENST00000504889 HACE1Q8IYU2 909 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 LINC01465Q8N7H1 131 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 TMEM87AQ8NBN3 555 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 MCPH1Q8NEM0 835 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 DEPTORQ8TB45 409 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 URGCPQ8TCY9 931 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 HELQQ8TDG4 1101 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 FOXD4L4Q8WXT5 416 aaPredicted RBP6.59□□□□□ -1.35
SPOP-208ENST00000504889 PPP2R3CQ969Q6 453 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 PGBD4Q96DM1 585 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 CALML4Q96GE6 196 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 PLIN2Q99541 437 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 HSD17B14Q9BPX1 270 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 POLR3CQ9BUI4 534 aaPredicted RBP6.59□□□□□ -1.35
SPOP-208ENST00000504889 GBP3Q9H0R5 595 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 BHMT2Q9H2M3 363 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 RNF39Q9H2S5 420 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 ALG13Q9NP73 1137 aaKnown RBP6.59□□□□□ -1.35
SPOP-208ENST00000504889 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.59□□□□□ -1.35
SPOP-208ENST00000504889 CHST12Q9NRB3 414 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 MTCH2Q9Y6C9 303 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 MRPL42Q9Y6G3 142 aaKnown RBP6.59□□□□□ -1.35
SPOP-208ENST00000504889 ARID2Q68CP9 1835 aa6.59□□□□□ -1.35
SPOP-208ENST00000504889 EYSQ5T1H1 3165 aa6.59□□□□□ -1.36
SPOP-208ENST00000504889 TET1Q8NFU7 2136 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 CCDC169A6NNP5 214 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 C9IYK1 514 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 E9PMD0 336 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 H3BNC9 293 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 TULP1O00294 542 aaPredicted RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 LPXNO60711 386 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 ZC3H11AO75152 810 aaKnown RBP eCLIP6.58□□□□□ -1.36
SPOP-208ENST00000504889 LYPLA2O95372 231 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 BMP15O95972 392 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 KRT18P05783 430 aaKnown RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 RB1P06400 928 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 SPATA31C1P0DKV0 1188 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 XRCC6P12956 609 aaKnown RBP eCLIP6.58□□□□□ -1.36
SPOP-208ENST00000504889 SYT1P21579 422 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 MUTP22033 750 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 BMPR1AP36894 532 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 PRPHP41219 470 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 RAB27AP51159 221 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 RAD51AP2Q09MP3 1159 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 CUL4AQ13619 759 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 CAPSQ13938 189 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 PDIA5Q14554 519 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 DHX8Q14562 1220 aaKnown RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 PPP2R5AQ15172 486 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 SF3A1Q15459 793 aaKnown RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 AAK1Q2M2I8 961 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 FOXD4L6Q3SYB3 417 aaPredicted RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 TIGD5Q53EQ6 642 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms