RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PURBQ96QR8 312 aaKnown RBP15.19■□□□□ 0.02
TCOF1-207ENST00000504761 POLR3CQ9BUI4 534 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-207ENST00000504761 SUCLA2Q9P2R7 463 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-207ENST00000504761 PARP4Q9UKK3 1724 aaKnown RBP15.19■□□□□ 0.02
TCOF1-207ENST00000504761 RGPD5Q99666 1765 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 SEMA3FQ13275 785 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 PDXDC1Q6P996 788 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 CPLX4Q7Z7G2 160 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 ARFGAP2Q8N6H7 521 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 GPRC5AQ8NFJ5 357 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 C11orf70Q9BRQ4 267 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 ATRNO75882 1429 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 TBC1D8O95759 1140 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 PNMA6AP0CW24 399 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-207ENST00000504761 SOX10P56693 466 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 FKBP1AP62942 108 aaKnown RBP15.19■□□□□ 0.02
TCOF1-207ENST00000504761 EMC2Q15006 297 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 GPD1LQ8N335 351 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 CHST13Q8NET6 341 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 OR6B3Q8NGW1 331 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 MRIQ9BWK5 157 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 MRPL4Q9BYD3 311 aaKnown RBP15.19■□□□□ 0.02
TCOF1-207ENST00000504761 PGRMC1O00264 195 aaKnown RBP15.19■□□□□ 0.02
TCOF1-207ENST00000504761 ABCD1P33897 745 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 CASP4P49662 377 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 ZNF699Q32M78 642 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 MUM1L1Q5H9M0 696 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 OR6B2Q6IFH4 312 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 FBXL13Q8NEE6 735 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 PNMA5Q96PV4 448 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 SNX25Q9H3E2 840 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 SEMA6BQ9H3T3 888 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 FHOD1Q9Y613 1164 aa15.19■□□□□ 0.02
TCOF1-207ENST00000504761 AFDNP55196 1824 aaKnown RBP15.18■□□□□ 0.02
TCOF1-207ENST00000504761 PITPNM2Q9BZ72 1349 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 VWA5AO00534 786 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 XPOTO43592 962 aaKnown RBP15.18■□□□□ 0.02
TCOF1-207ENST00000504761 UCHL3P15374 230 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 ATP2A2P16615 1042 aaKnown RBP15.18■□□□□ 0.02
TCOF1-207ENST00000504761 CTNNA1P35221 906 aaKnown RBP15.18■□□□□ 0.02
TCOF1-207ENST00000504761 BFSP1Q12934 665 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 SEZ6Q53EL9 994 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 CASC4Q6P4E1 433 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 NFRKBQ6P4R8 1299 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 MOB2Q70IA6 237 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 PNMA8AQ86V59 439 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-207ENST00000504761 RSAD2Q8WXG1 361 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 TARS2Q9BW92 718 aaKnown RBP15.18■□□□□ 0.02
TCOF1-207ENST00000504761 ADAM22Q9P0K1 906 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 CNOT8Q9UFF9 292 aaKnown RBP15.18■□□□□ 0.02
TCOF1-207ENST00000504761 FEZ2Q9UHY8 353 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-207ENST00000504761 INPP5FQ9Y2H2 1132 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 FAM169AQ9Y6X4 670 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 SNRNP35Q16560 246 aaKnown RBP15.18■□□□□ 0.02
TCOF1-207ENST00000504761 CEP85LQ5SZL2 805 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 TTI2Q6NXR4 508 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 GJB7Q6PEY0 223 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 ABI1Q8IZP0 508 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 GPC2Q8N158 579 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 OR6J1Q8NGC5 347 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 TRPM4Q8TD43 1214 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 AFAP1L1Q8TED9 768 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 KIAA1586Q9HCI6 787 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 EML1O00423 815 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 CYP26A1O43174 497 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 FTLP02792 175 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-207ENST00000504761 FGRP09769 529 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 FMO5P49326 533 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 MYO1EQ12965 1108 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 GIT2Q14161 759 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 ANAPC7Q9UJX3 599 aa15.18■□□□□ 0.02
TCOF1-207ENST00000504761 HGSO14964 777 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 CIITAP33076 1130 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 CNTN2Q02246 1040 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 RNASELQ05823 741 aaKnown RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 MKL1Q969V6 931 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 OPTNQ96CV9 577 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 CAMKK2Q96RR4 588 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 C6orf222P0C671 652 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 ZNF211Q13398 564 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 TRIP13Q15645 432 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 EDRF1Q3B7T1 1238 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 CALN1Q9BXU9 219 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 STMN4Q9H169 189 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 FAM208AQ9UK61 1670 aaKnown RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 PRKCBP05771 671 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 TCF7P36402 384 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 CDO1Q16878 200 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 FBXO16Q8IX29 292 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 SMAP1Q8IYB5 467 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 ELOA2Q8IYF1 753 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 P2RX7Q99572 595 aaKnown RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 VPS37BQ9H9H4 285 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 PDE11AQ9HCR9 933 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 EIF3CLB5ME19 914 aaKnown RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 MAFGO15525 162 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 SLC25A27O95847 323 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 PTPRAP18433 802 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 FKBP1CQ5VVH2 108 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms