RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 TMEM117Q9H0C3 514 aa25.39■■□□□ 1.66
CDC42SE2-207ENST00000504701 PCDHB12Q9Y5F1 795 aa25.39■■□□□ 1.66
CDC42SE2-207ENST00000504701 MEIS3P2A8K0S8 358 aa25.38■■□□□ 1.65
CDC42SE2-207ENST00000504701 PER2O15055 1255 aa25.38■■□□□ 1.65
CDC42SE2-207ENST00000504701 TBX3O15119 743 aa25.38■■□□□ 1.65
CDC42SE2-207ENST00000504701 GLP2RO95838 553 aa25.38■■□□□ 1.65
CDC42SE2-207ENST00000504701 EPHA7Q15375 998 aa25.38■■□□□ 1.65
CDC42SE2-207ENST00000504701 DIS3L2Q8IYB7 885 aaKnown RBP25.38■■□□□ 1.65
CDC42SE2-207ENST00000504701 GJD3Q8N144 294 aa25.38■■□□□ 1.65
CDC42SE2-207ENST00000504701 LPPQ93052 612 aa25.38■■□□□ 1.65
CDC42SE2-207ENST00000504701 CEP170P1Q96L14 293 aa25.38■■□□□ 1.65
CDC42SE2-207ENST00000504701 FAM86C2PA6NEL3 165 aa25.37■■□□□ 1.65
CDC42SE2-207ENST00000504701 MARCH6O60337 910 aa25.37■■□□□ 1.65
CDC42SE2-207ENST00000504701 SSTR3P32745 418 aaPredicted RBP25.37■■□□□ 1.65
CDC42SE2-207ENST00000504701 IFT122Q9HBG6 1241 aa25.37■■□□□ 1.65
CDC42SE2-207ENST00000504701 C11orf16Q9NQ32 467 aa25.37■■□□□ 1.65
CDC42SE2-207ENST00000504701 CLEC1BQ9P126 229 aa25.37■■□□□ 1.65
CDC42SE2-207ENST00000504701 A0A087WWV3 80 aa25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 A0A0U1RQF3 1178 aa25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 MBTPS2O43462 519 aa25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 YWHABP31946 246 aaKnown RBP25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 DNM2P50570 870 aa25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 CCDC83Q8IWF9 413 aa25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 VN1R2Q8NFZ6 395 aa25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 DHX33Q9H6R0 707 aaKnown RBP25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 MINDY3Q9H8M7 445 aa25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 TLR9Q9NR96 1032 aa25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 BARX2Q9UMQ3 279 aaPredicted RBP25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 PIN4Q9Y237 131 aaKnown RBP25.36■■□□□ 1.65
CDC42SE2-207ENST00000504701 LAG3P18627 525 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 NDUFV1P49821 464 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 ZP2Q05996 745 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 PLPP4Q5VZY2 271 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 KCNT2Q6UVM3 1135 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 FAM43BQ6ZT52 329 aaPredicted RBP25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 ZNF410Q86VK4 478 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 C4orf19Q8IY42 314 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 ZNF710Q8N1W2 664 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 MICAL1Q8TDZ2 1067 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 MSLNLQ96KJ4 702 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 BRMS1Q9HCU9 246 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 AAASQ9NRG9 546 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 RNF216Q9NWF9 866 aaPredicted RBP25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 COL4A3BPQ9Y5P4 624 aa25.35■■□□□ 1.65
CDC42SE2-207ENST00000504701 FSCN2O14926 492 aa25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 NCK2O43639 380 aa25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 PHKA2P46019 1235 aa25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 POLGP54098 1239 aaPredicted RBP25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 CALCRLQ16602 461 aa25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 PUS10Q3MIT2 529 aaKnown RBP25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 TPH2Q8IWU9 490 aa25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 ABI1Q8IZP0 508 aa25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 LRRC43Q8N309 656 aa25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 EFHBQ8N7U6 833 aa25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 PRPF31Q8WWY3 499 aaKnown RBP25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 KIF2CQ99661 725 aa25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 NAP1L4Q99733 375 aaKnown RBP25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 EIF2AK1Q9BQI3 630 aaKnown RBP25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 TMEM60Q9H2L4 133 aa25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 CD207Q9UJ71 328 aa25.34■■□□□ 1.65
CDC42SE2-207ENST00000504701 NT5C1B-RDH14C9J2C7 533 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 SLITRK3O94933 977 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 SRGAP2CP0DJJ0 459 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 ATP2B1P20020 1258 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 SFPQP23246 707 aaKnown RBP eCLIP25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 EMC2Q15006 297 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 C8orf34Q49A92 452 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 XKR9Q5GH70 373 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 TWF2Q6IBS0 349 aaKnown RBP25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 CATSPER4Q7RTX7 472 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 SLFN12Q8IYM2 578 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 LRFN3Q9BTN0 628 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 TLE6Q9H808 572 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 XPNPEP1Q9NQW7 623 aa25.33■■□□□ 1.65
CDC42SE2-207ENST00000504701 HIDE1A8MVS5 230 aa25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 HOXA2O43364 376 aa25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 BAG4O95429 457 aaKnown RBP25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 TXKP42681 527 aa25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 UBE3AQ05086 875 aa25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 LAMTOR4Q0VGL1 99 aa25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 SMAD2Q15796 467 aaKnown RBP25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 SLC7A3Q8WY07 619 aa25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 MRPS27Q92552 414 aaKnown RBP25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 ZNF558Q96NG5 402 aa25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 ZSWIM4Q9H7M6 989 aa25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 DACT1Q9NYF0 836 aa25.32■■□□□ 1.64
CDC42SE2-207ENST00000504701 POTEMA6NI47 508 aa25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 PI4K2BG5E9Z4 385 aa25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 B4GALT3O60512 393 aa25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 EOMESO95936 686 aa25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 SMAD4Q13485 552 aaKnown RBP25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 TMEM173Q86WV6 379 aaPredicted RBP25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 MTMR9Q96QG7 549 aa25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 C1QTNF1Q9BXJ1 281 aa25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 TTC12Q9H892 705 aaPredicted RBP25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 CHST12Q9NRB3 414 aa25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 FAM105AQ9NUU6 356 aa25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 PCDHA12Q9UN75 941 aa25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 LIMCH1Q9UPQ0 1083 aa25.31■■□□□ 1.64
CDC42SE2-207ENST00000504701 C19orf67A6NJJ6 358 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms