RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PTGDRQ13258 359 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 ZNF410Q86VK4 478 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 CATSPER3Q86XQ3 398 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 EXOC8Q8IYI6 725 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 ABI1Q8IZP0 508 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 RNF149Q8NC42 400 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 ERMNQ8TAM6 284 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 TCP11Q8WWU5 503 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 C11orf84Q9BUA3 381 aaPredicted RBP15.88■□□□□ 0.13
HOXC9-202ENST00000504557 INO80BQ9C086 356 aaPredicted RBP15.88■□□□□ 0.13
HOXC9-202ENST00000504557 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 TMEM161AQ9NX61 479 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 RWDD3Q9Y3V2 267 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.88■□□□□ 0.13
HOXC9-202ENST00000504557 LINC00271P0C7V0 271 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 SPATA31C1P0DKV0 1188 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 CCT6AP40227 531 aaKnown RBP15.87■□□□□ 0.13
HOXC9-202ENST00000504557 TRAPPC10P48553 1259 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 RARRES1P49788 294 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 KCNQ1P51787 676 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 MRPS5P82675 430 aaKnown RBP15.87■□□□□ 0.13
HOXC9-202ENST00000504557 LARP1BQ659C4 914 aaKnown RBP15.87■□□□□ 0.13
HOXC9-202ENST00000504557 FERMT3Q86UX7 667 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 ECHDC2Q86YB7 292 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 CLP1Q92989 425 aaKnown RBP15.87■□□□□ 0.13
HOXC9-202ENST00000504557 LPPQ93052 612 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 MRPL38Q96DV4 380 aaKnown RBP15.87■□□□□ 0.13
HOXC9-202ENST00000504557 XPNPEP1Q9NQW7 623 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 ANKEF1Q9NU02 776 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 TYW1Q9NV66 732 aaKnown RBP15.87■□□□□ 0.13
HOXC9-202ENST00000504557 RNF216Q9NWF9 866 aaPredicted RBP15.87■□□□□ 0.13
HOXC9-202ENST00000504557 LMCD1Q9NZU5 365 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 LRWD1Q9UFC0 647 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 PPME1Q9Y570 386 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 MYH11P35749 1972 aa15.87■□□□□ 0.13
HOXC9-202ENST00000504557 A0A0C4DFX4 3053 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 DGAT1O75907 488 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 LYPLA2O95372 231 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 ORC2Q13416 577 aaPredicted RBP15.86■□□□□ 0.13
HOXC9-202ENST00000504557 ZRSR1Q15695 479 aaKnown RBP15.86■□□□□ 0.13
HOXC9-202ENST00000504557 TCEAL5Q5H9L2 206 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 TJAP1Q5JTD0 557 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 KLHL23Q8NBE8 558 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 HELQQ8TDG4 1101 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 ASAP3Q8TDY4 903 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 HLA-CQ95604 372 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 ASB2Q96Q27 587 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 POLR3FQ9H1D9 316 aaPredicted RBP15.86■□□□□ 0.13
HOXC9-202ENST00000504557 MINDY3Q9H8M7 445 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 IFT122Q9HBG6 1241 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 TUFT1Q9NNX1 390 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 GPRC5CQ9NQ84 441 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 DACT1Q9NYF0 836 aa15.86■□□□□ 0.13
HOXC9-202ENST00000504557 VPS37CA5D8V6 355 aaPredicted RBP15.85■□□□□ 0.13
HOXC9-202ENST00000504557 PP2D1A8MPX8 630 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 C5orf67F2Z3F1 127 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 INO80B-WBP1J3KQ70 363 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 GAS2O43903 313 aaKnown RBP15.85■□□□□ 0.13
HOXC9-202ENST00000504557 ERLIN2O94905 339 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 ITGB1P05556 798 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 RB1P06400 928 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 PBX3P40426 434 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 PHKA2P46019 1235 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 FAM189BP81408 668 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 TIGD5Q53EQ6 642 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 HAUS3Q68CZ6 603 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 THNSL1Q8IYQ7 743 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 C4orf32Q8N8J7 132 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 SNX29Q8TEQ0 813 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 ATXN2LQ8WWM7 1075 aaKnown RBP15.85■□□□□ 0.13
HOXC9-202ENST00000504557 POLR3CQ9BUI4 534 aaPredicted RBP15.85■□□□□ 0.13
HOXC9-202ENST00000504557 IGFLR1Q9H665 355 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 ELAC1Q9H777 363 aaKnown RBP15.85■□□□□ 0.13
HOXC9-202ENST00000504557 POLD4Q9HCU8 107 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 PLAGL2Q9UPG8 496 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 INPP5FQ9Y2H2 1132 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 PCDHB12Q9Y5F1 795 aa15.85■□□□□ 0.13
HOXC9-202ENST00000504557 TDRD15B5MCY1 1934 aaKnown RBP15.84■□□□□ 0.13
HOXC9-202ENST00000504557 A0A0U1RQF3 1178 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 ARHGEF35A5YM69 484 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 LRRIQ4A6NIV6 560 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 ASAP2O43150 1006 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 CDC25AP30304 524 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 CAPSQ13938 189 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 TFDP1Q14186 410 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 CLLU1OSQ5K130 101 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 SRGAP1Q7Z6B7 1085 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 COLGALT1Q8NBJ5 622 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 CPB2Q96IY4 423 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 CASD1Q96PB1 797 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 NACC1Q96RE7 527 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 PLVAPQ9BX97 442 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 TMEM117Q9H0C3 514 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 NSUN3Q9H649 340 aaKnown RBP15.84■□□□□ 0.13
HOXC9-202ENST00000504557 CHST12Q9NRB3 414 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 AAASQ9NRG9 546 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 RNF19AQ9NV58 838 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 KIAA1024Q9UPX6 916 aa15.84■□□□□ 0.13
HOXC9-202ENST00000504557 MEIS3P2A8K0S8 358 aa15.83■□□□□ 0.12
HOXC9-202ENST00000504557 HOXA2O43364 376 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms