RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 MYO7AQ13402 2215 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 ABCB11O95342 1321 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 EMSYQ7Z589 1322 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 LAMA4Q16363 1823 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 MYH6P13533 1939 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 A0A1W2PNR3 127 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 C2CD4DB7Z1M9 353 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 CFBP00751 764 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 SLC3A2P08195 630 aaKnown RBP4.23□□□□□ -1.73
USP46-205ENST00000504078 FAM157BP0CG42 384 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 ATP4AP20648 1035 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 CD52P31358 61 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 BMPR1AP36894 532 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 TECP42680 631 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 IGBP1P78318 339 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 SP2Q02086 613 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 ZNF543Q08ER8 600 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 ADAM15Q13444 863 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 TMEM266Q2M3C6 531 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 QRICH1Q2TAL8 776 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 GIMAP6Q6P9H5 292 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 DGLUCYQ7Z3D6 616 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 EFHBQ8N7U6 833 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 ST13P5Q8NFI4 369 aaPredicted RBP4.23□□□□□ -1.73
USP46-205ENST00000504078 DNERQ8NFT8 737 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 PPTC7Q8NI37 304 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 KCNG4Q8TDN1 519 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 LMBR1Q8WVP7 490 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 PIBF1Q8WXW3 757 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 NKD2Q969F2 451 aaPredicted RBP4.23□□□□□ -1.73
USP46-205ENST00000504078 RMDN3Q96TC7 470 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 MPHOSPH6Q99547 160 aaKnown RBP4.23□□□□□ -1.73
USP46-205ENST00000504078 C16orf70Q9BSU1 422 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 SSBP4Q9BWG4 385 aaPredicted RBP4.23□□□□□ -1.73
USP46-205ENST00000504078 PHF7Q9BWX1 381 aaPredicted RBP4.23□□□□□ -1.73
USP46-205ENST00000504078 NACAP1Q9BZK3 213 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 FAM49AQ9H0Q0 323 aaPredicted RBP4.23□□□□□ -1.73
USP46-205ENST00000504078 LMAN2LQ9H0V9 348 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 MFSD1Q9H3U5 465 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 POMKQ9H5K3 350 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 ZNF287Q9HBT7 754 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 ETNK1Q9HBU6 452 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 VAT1LQ9HCJ6 419 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 PXMP2Q9NR77 195 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 ECHDC1Q9NTX5 307 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 MARK1Q9P0L2 795 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 DDX41Q9UJV9 622 aaKnown RBP4.23□□□□□ -1.73
USP46-205ENST00000504078 HCN2Q9UL51 889 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 SYNPO2Q9UMS6 1093 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 PLAGL2Q9UPG8 496 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 CDY2AQ9Y6F7 541 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 R4GN57 208 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 DMDP11532 3685 aa4.23□□□□□ -1.73
USP46-205ENST00000504078 VPS13AQ96RL7 3174 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 WDR19Q8NEZ3 1342 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 CACNA1AO00555 2505 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 A0A0D9SFI3 127 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 C5orf67F2Z3F1 127 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 NOP56O00567 594 aaKnown RBP4.22□□□□□ -1.73
USP46-205ENST00000504078 OPLAHO14841 1288 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 PI15O43692 258 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 PLA2G6O60733 806 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 SIN3BO75182 1162 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 HMMRO75330 724 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 PARNO95453 639 aaKnown RBP4.22□□□□□ -1.73
USP46-205ENST00000504078 EYA4O95677 639 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 CHRNA1P02708 482 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 TOP1P11387 765 aaKnown RBP4.22□□□□□ -1.73
USP46-205ENST00000504078 NID1P14543 1247 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 GNAT2P19087 354 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 ICAM3P32942 547 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 NBL1P41271 181 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 LPIN1Q14693 890 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 CBX2Q14781 532 aaPredicted RBP4.22□□□□□ -1.73
USP46-205ENST00000504078 STXBP2Q15833 593 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 CELF3Q5SZQ8 465 aaKnown RBP4.22□□□□□ -1.73
USP46-205ENST00000504078 RARS2Q5T160 578 aaKnown RBP4.22□□□□□ -1.73
USP46-205ENST00000504078 C20orf194Q5TEA3 1177 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 BTNL9Q6UXG8 535 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 ERMP1Q7Z2K6 904 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 HOMER1Q86YM7 354 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 DCLK2Q8N568 766 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 C12orf76Q8N812 135 aaPredicted RBP4.22□□□□□ -1.73
USP46-205ENST00000504078 SPPL3Q8TCT6 385 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 MICAL1Q8TDZ2 1067 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 NSUN6Q8TEA1 469 aaKnown RBP4.22□□□□□ -1.73
USP46-205ENST00000504078 TRAPPC12Q8WVT3 735 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 RIPOR3Q96MK2 946 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 PRRX2Q99811 253 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 LRRCC1Q9C099 1032 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 RNPEPQ9H4A4 650 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 TLE6Q9H808 572 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 AGO3Q9H9G7 860 aaKnown RBP4.22□□□□□ -1.73
USP46-205ENST00000504078 MLXIPQ9HAP2 919 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 ENTPD7Q9NQZ7 604 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 DENND4AQ7Z401 1863 aa4.22□□□□□ -1.73
USP46-205ENST00000504078 DMXL1Q9Y485 3027 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 LOC102724159A0A0B4J2E5 919 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 TBKBP1A7MCY6 615 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 HIDE1A8MVS5 230 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms