RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ANKRD20A2Q5SQ80 823 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 ANKRD20A1Q5TYW2 823 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 ATG16L1Q676U5 607 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 POTEBQ6S5H4 581 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 ERICH1Q86X53 443 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 DYDC2Q96IM9 177 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 KCNF1Q9H3M0 494 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 LCMT1Q9UIC8 334 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 MID2Q9UJV3 735 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 TLK1Q9UKI8 766 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 TADA3O75528 432 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 DCTN3O75935 186 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 NR1H3Q13133 447 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 PDIA5Q14554 519 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 MMS22LQ6ZRQ5 1243 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 RBM41Q96IZ5 413 aaKnown RBP17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 RNF181Q9P0P0 153 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 ANAPC7Q9UJX3 599 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 ESRRAP11474 423 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 IFRD2Q12894 506 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 STYK1Q6J9G0 422 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 RAB44Q7Z6P3 723 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 NLRP4Q96MN2 994 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 KDM6AO15550 1401 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 ZRANB2O95218 330 aaKnown RBP eCLIP17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 BANK1Q8NDB2 785 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.3■□□□□ 0.363e-7■■■□□ 16
HMGXB3-202ENST00000503427 LIMA1Q9UHB6 759 aaKnown RBP17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 BAG5Q9UL15 447 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 NAALADL2Q58DX5 795 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 C16orf86Q6ZW13 317 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 ADAM22Q9P0K1 906 aa17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 TPX2Q9ULW0 747 aaKnown RBP17.3■□□□□ 0.36
HMGXB3-202ENST00000503427 CCZ1BP86790 482 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 CCZ1P86791 482 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 PCGF5Q86SE9 256 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 RPAINQ86UA6 219 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 BBS5Q8N3I7 341 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 PHF20Q9BVI0 1012 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 TDP2O95551 362 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 ZBED1O96006 694 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 ABL1P00519 1130 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 PLCB4Q15147 1175 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 TBC1D1Q86TI0 1168 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 RUBCNQ92622 972 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 MAP3K14Q99558 947 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 SCOCQ9UIL1 159 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 TOM1L1O75674 476 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 MARK3P27448 753 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 PSMC5P62195 406 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 MAPK6Q16659 721 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 COG1Q8WTW3 980 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 LPAR1Q92633 364 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 WDR24Q96S15 920 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 TAF1DQ9H5J8 278 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 HDAC6Q9UBN7 1215 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 ANGPTL2Q9UKU9 493 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 PDS5AQ29RF7 1337 aaKnown RBP17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 A0A1B0GTH6 734 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 LDHDQ86WU2 507 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 GSPT2Q8IYD1 628 aaKnown RBP17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 SAYSD1Q9NPB0 183 aa17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 DNAJC17Q9NVM6 304 aaKnown RBP17.29■□□□□ 0.36
HMGXB3-202ENST00000503427 GUCY1A2P33402 732 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 STAT3P40763 770 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 DPF2Q92785 391 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 EFHD1Q9BUP0 239 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 CCSER1Q9C0I3 900 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 GINM1Q9NU53 330 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 FGFR1OP2Q9NVK5 253 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 GMNCA6NCL1 334 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 MAP3K7O43318 606 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 KRT37O76014 449 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 PPP2R2AP63151 447 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 E4F1Q66K89 784 aaPredicted RBP17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 SLITRK6Q9H5Y7 841 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 SPATS2LQ9NUQ6 558 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 WDR91A4D1P6 747 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 TTI1O43156 1089 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 PMS2P54278 862 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 MKRN3Q13064 507 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 INTS5Q6P9B9 1019 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 ZNF449Q6P9G9 518 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 TTC13Q8NBP0 860 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 EPC1Q9H2F5 836 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 ZCCHC17Q9NP64 241 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 CLDN3O15551 220 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 CHRNA3P32297 505 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 ARL4CP56559 192 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 MAGOHP61326 146 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 TNFAIP2Q03169 654 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 AP1ARQ63HQ0 302 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 CDC42EP5Q6NZY7 148 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 MORC4Q8TE76 937 aa17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 EPB41L4AQ9HCS5 686 aaPredicted RBP17.28■□□□□ 0.36
HMGXB3-202ENST00000503427 FAM187AA6NFU0 413 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 NCK2O43639 380 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 ATP5HO75947 161 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 GNAT1P11488 350 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms