RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 POLGP54098 1239 aaPredicted RBP21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 CYP4A11Q02928 519 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 DLX2Q07687 328 aaPredicted RBP21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 ST3GAL1Q11201 340 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 CTTNQ14247 550 aaKnown RBP21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 CTC1Q2NKJ3 1217 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 ZNF410Q86VK4 478 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 FAM178BQ8IXR5 827 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 MICAL1Q8TDZ2 1067 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 INO80BQ9C086 356 aaPredicted RBP21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 CD320Q9NPF0 282 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 FAM50BQ9Y247 325 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 PCDHGC5Q9Y5F6 944 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 A0A0U1RQF3 1178 aa21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 YWHABP31946 246 aaKnown RBP21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 SSTR3P32745 418 aaPredicted RBP21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 NDUFV1P49821 464 aa21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 UBE3AQ05086 875 aa21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 SPIRE1Q08AE8 756 aa21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 CALCRLQ16602 461 aa21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 CSPP1Q1MSJ5 1256 aa21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 RBM23Q86U06 439 aaKnown RBP21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 C4orf19Q8IY42 314 aa21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 LRRC43Q8N309 656 aa21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 TLR9Q9NR96 1032 aa21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 PIN4Q9Y237 131 aaKnown RBP21.75■■□□□ 1.07
UBE2D3-215ENST00000503418 NEMFO60524 1076 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 TBX10O75333 385 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 NRIP1P48552 1158 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 GUCY1B3Q02153 619 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 CLLU1OSQ5K130 101 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 TWF2Q6IBS0 349 aaKnown RBP21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 LRRC55Q6ZSA7 311 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 OTUD6AQ7L8S5 288 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 CATSPER4Q7RTX7 472 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 CCDC83Q8IWF9 413 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 TPH2Q8IWU9 490 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 EXOC8Q8IYI6 725 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 GJD3Q8N144 294 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 HELQQ8TDG4 1101 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 TMEM143Q96AN5 459 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 EPHX3Q9H6B9 360 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 ZSWIM4Q9H7M6 989 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 CHST12Q9NRB3 414 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 PCDHA12Q9UN75 941 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 LIMCH1Q9UPQ0 1083 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 PPME1Q9Y570 386 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 COL4A3BPQ9Y5P4 624 aa21.74■■□□□ 1.07
UBE2D3-215ENST00000503418 WNT7AO00755 349 aa21.73■■□□□ 1.07
UBE2D3-215ENST00000503418 EOMESO95936 686 aa21.73■■□□□ 1.07
UBE2D3-215ENST00000503418 ATF7P17544 494 aaPredicted RBP21.73■■□□□ 1.07
UBE2D3-215ENST00000503418 RFC5P40937 340 aa21.73■■□□□ 1.07
UBE2D3-215ENST00000503418 ADAM15Q13444 863 aa21.73■■□□□ 1.07
UBE2D3-215ENST00000503418 XKR9Q5GH70 373 aa21.73■■□□□ 1.07
UBE2D3-215ENST00000503418 ZNF598Q86UK7 904 aaKnown RBP21.73■■□□□ 1.07
UBE2D3-215ENST00000503418 PSPC1Q8WXF1 523 aaKnown RBP21.73■■□□□ 1.07
UBE2D3-215ENST00000503418 KHSRPQ92945 711 aaKnown RBP eCLIP21.73■■□□□ 1.074e-7■■■■□ 19.6
UBE2D3-215ENST00000503418 C1QTNF1Q9BXJ1 281 aa21.73■■□□□ 1.07
UBE2D3-215ENST00000503418 DHX33Q9H6R0 707 aaKnown RBP21.73■■□□□ 1.07
UBE2D3-215ENST00000503418 ZBTB39O15060 712 aa21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 SRGAP2CP0DJJ0 459 aa21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 ATP2B1P20020 1258 aa21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 PBX3P40426 434 aa21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 EMC2Q15006 297 aa21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 SAFBQ15424 915 aaKnown RBP eCLIP21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 KCNT2Q6UVM3 1135 aa21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 PRPF31Q8WWY3 499 aaKnown RBP21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 ZNF558Q96NG5 402 aa21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 EIF2AK1Q9BQI3 630 aaKnown RBP21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 TLE6Q9H808 572 aa21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 TTC12Q9H892 705 aaPredicted RBP21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 CD207Q9UJ71 328 aa21.72■■□□□ 1.07
UBE2D3-215ENST00000503418 COL9A1P20849 921 aa21.71■■□□□ 1.07
UBE2D3-215ENST00000503418 TXKP42681 527 aa21.71■■□□□ 1.07
UBE2D3-215ENST00000503418 PHKA2P46019 1235 aa21.71■■□□□ 1.07
UBE2D3-215ENST00000503418 ERVFC1P60507 584 aa21.71■■□□□ 1.07
UBE2D3-215ENST00000503418 LONRF3Q496Y0 759 aa21.71■■□□□ 1.07
UBE2D3-215ENST00000503418 EFHBQ8N7U6 833 aa21.71■■□□□ 1.07
UBE2D3-215ENST00000503418 TCP11Q8WWU5 503 aa21.71■■□□□ 1.07
UBE2D3-215ENST00000503418 MRPS27Q92552 414 aaKnown RBP21.71■■□□□ 1.07
UBE2D3-215ENST00000503418 MTRQ99707 1265 aa21.71■■□□□ 1.07
UBE2D3-215ENST00000503418 IFT122Q9HBG6 1241 aa21.71■■□□□ 1.07
UBE2D3-215ENST00000503418 PER2O15055 1255 aa21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 MBTPS2O43462 519 aa21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 GAS2O43903 313 aaKnown RBP21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 SLITRK3O94933 977 aa21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 PPM1AP35813 382 aa21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 LAMTOR4Q0VGL1 99 aa21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 SMAD4Q13485 552 aaKnown RBP21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 PLPP4Q5VZY2 271 aa21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 LPPQ93052 612 aa21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 C8orf76Q96K31 380 aa21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 MRPL9Q9BYD2 267 aaKnown RBP21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 ENTPD7Q9NQZ7 604 aa21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 FAM105AQ9NUU6 356 aa21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 PUF60Q9UHX1 559 aaKnown RBP21.7■■□□□ 1.06
UBE2D3-215ENST00000503418 SKIP12755 728 aa21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 MCM7P33993 719 aa21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 PLCB3Q01970 1234 aa21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 KRT17Q04695 432 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms