RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 VSIG10L2P0DP72 767 aa6.4□□□□□ -1.38
CCSER1-202ENST00000502478 SMAD3P84022 425 aaKnown RBP6.4□□□□□ -1.38
CCSER1-202ENST00000502478 COL10A1Q03692 680 aa6.4□□□□□ -1.38
CCSER1-202ENST00000502478 BMP8AQ7Z5Y6 402 aa6.4□□□□□ -1.38
CCSER1-202ENST00000502478 DDX53Q86TM3 631 aaKnown RBP6.4□□□□□ -1.38
CCSER1-202ENST00000502478 GSPT2Q8IYD1 628 aaKnown RBP6.4□□□□□ -1.38
CCSER1-202ENST00000502478 RPUSD2Q8IZ73 545 aaKnown RBP6.4□□□□□ -1.38
CCSER1-202ENST00000502478 MKL1Q969V6 931 aa6.4□□□□□ -1.38
CCSER1-202ENST00000502478 TTPALQ9BTX7 342 aa6.4□□□□□ -1.38
CCSER1-202ENST00000502478 ACSS2Q9NR19 701 aa6.4□□□□□ -1.38
CCSER1-202ENST00000502478 POLR3BQ9NW08 1133 aaPredicted RBP6.4□□□□□ -1.38
CCSER1-202ENST00000502478 XDHP47989 1333 aa6.4□□□□□ -1.39
CCSER1-202ENST00000502478 BAZ1BQ9UIG0 1483 aaKnown RBP6.4□□□□□ -1.39
CCSER1-202ENST00000502478 SMARCA2P51531 1590 aa6.4□□□□□ -1.39
CCSER1-202ENST00000502478 TMEM191CA6NGB0 347 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 B4E1Z4 1266 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 E9PSI1 815 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 M0R2C6 588 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 TOX4O94842 621 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 PTGS2P35354 604 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 C2orf27AQ580R0 203 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 TTC38Q5R3I4 469 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 FKBP15Q5T1M5 1219 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 ZCCHC8Q6NZY4 707 aaKnown RBP6.39□□□□□ -1.39
CCSER1-202ENST00000502478 PLA2G15Q8NCC3 412 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 CHST14Q8NCH0 376 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 DYDC2Q96IM9 177 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 C16orf92Q96LL3 132 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 WDR92Q96MX6 357 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 C8orf37Q96NL8 207 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 SRPK1Q96SB4 655 aaKnown RBP6.39□□□□□ -1.39
CCSER1-202ENST00000502478 NRDE2Q9H7Z3 1164 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 PTCH2Q9Y6C5 1203 aa6.39□□□□□ -1.39
CCSER1-202ENST00000502478 PPFIA2O75334 1257 aa6.38□□□□□ -1.39
CCSER1-202ENST00000502478 RPS6KA4O75676 772 aa6.38□□□□□ -1.39
CCSER1-202ENST00000502478 GLRX3O76003 335 aaKnown RBP6.38□□□□□ -1.39
CCSER1-202ENST00000502478 C1QL3Q5VWW1 255 aa6.38□□□□□ -1.39
CCSER1-202ENST00000502478 MFSD5Q6N075 450 aa6.38□□□□□ -1.39
CCSER1-202ENST00000502478 MRGPREQ86SM8 312 aa6.38□□□□□ -1.39
CCSER1-202ENST00000502478 CRAMP1Q96RY5 1269 aa6.38□□□□□ -1.39
CCSER1-202ENST00000502478 SAMD15Q9P1V8 674 aa6.38□□□□□ -1.39
CCSER1-202ENST00000502478 TRPS1Q9UHF7 1281 aa6.38□□□□□ -1.39
CCSER1-202ENST00000502478 RCAN3Q9UKA8 241 aa6.38□□□□□ -1.39
CCSER1-202ENST00000502478 BAZ1AQ9NRL2 1556 aaPredicted RBP6.38□□□□□ -1.39
CCSER1-202ENST00000502478 PLD2O14939 933 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 CYP17A1P05093 508 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 JUNP05412 331 aaKnown RBP6.37□□□□□ -1.39
CCSER1-202ENST00000502478 BCAR1P56945 870 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 MYBPC3Q14896 1274 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 EPHA7Q15375 998 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 RABL3Q5HYI8 236 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 PRAMEF9Q5VWM5 478 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 KRT40Q6A162 431 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 LAIR1Q6GTX8 287 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 RHOUQ7L0Q8 258 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 SLC25A43Q8WUT9 341 aaPredicted RBP6.37□□□□□ -1.39
CCSER1-202ENST00000502478 LENG9Q96B70 501 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 MNTQ99583 582 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 PCIF1Q9H4Z3 704 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 DNAI1Q9UI46 699 aa6.37□□□□□ -1.39
CCSER1-202ENST00000502478 MROH2BQ7Z745 1585 aa6.36□□□□□ -1.39
CCSER1-202ENST00000502478 HMGXB3Q12766 1538 aa6.36□□□□□ -1.39
CCSER1-202ENST00000502478 CUX2O14529 1486 aa6.36□□□□□ -1.39
CCSER1-202ENST00000502478 GOLGA6L6A8MZA4 724 aa6.36□□□□□ -1.39
CCSER1-202ENST00000502478 FAM20BO75063 409 aa6.36□□□□□ -1.39
CCSER1-202ENST00000502478 IGFALSP35858 605 aa6.36□□□□□ -1.39
CCSER1-202ENST00000502478 NME9Q86XW9 330 aa6.36□□□□□ -1.39
CCSER1-202ENST00000502478 ELOA2Q8IYF1 753 aaPredicted RBP6.36□□□□□ -1.39
CCSER1-202ENST00000502478 KIAA1958Q8N8K9 716 aa6.36□□□□□ -1.39
CCSER1-202ENST00000502478 MDGA1Q8NFP4 955 aa6.36□□□□□ -1.39
CCSER1-202ENST00000502478 ATXN2LQ8WWM7 1075 aaKnown RBP6.36□□□□□ -1.39
CCSER1-202ENST00000502478 RPGRQ92834 1020 aaKnown RBP6.36□□□□□ -1.39
CCSER1-202ENST00000502478 HAS1Q92839 578 aa6.36□□□□□ -1.39
CCSER1-202ENST00000502478 ZNF512Q96ME7 567 aaPredicted RBP6.36□□□□□ -1.39
CCSER1-202ENST00000502478 TUBGCP5Q96RT8 1024 aa6.36□□□□□ -1.39
CCSER1-202ENST00000502478 PITHD1Q9GZP4 211 aaPredicted RBP6.36□□□□□ -1.39
CCSER1-202ENST00000502478 C14orf93Q9H972 538 aaKnown RBP6.36□□□□□ -1.39
CCSER1-202ENST00000502478 PTPDC1A2A3K4 754 aa6.35□□□□□ -1.39
CCSER1-202ENST00000502478 GRXCR1A8MXD5 290 aa6.35□□□□□ -1.39
CCSER1-202ENST00000502478 MTSS1O43312 755 aa6.35□□□□□ -1.39
CCSER1-202ENST00000502478 IPO13O94829 963 aaKnown RBP6.35□□□□□ -1.39
CCSER1-202ENST00000502478 NAIF1Q69YI7 327 aaPredicted RBP6.35□□□□□ -1.39
CCSER1-202ENST00000502478 ZNF276Q8N554 614 aa6.35□□□□□ -1.39
CCSER1-202ENST00000502478 H7C1D1 291 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 DAPK3O43293 454 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 MFAP3LO75121 409 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 RAPGEF3O95398 923 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 ASLP04424 464 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 HNRNPLP14866 589 aaKnown RBP eCLIP6.34□□□□□ -1.39
CCSER1-202ENST00000502478 PTX3P26022 381 aaPredicted RBP6.34□□□□□ -1.39
CCSER1-202ENST00000502478 KIR2DL3P43628 341 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 FSTL1Q12841 308 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 SPIDRQ14159 915 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 FNDC3BQ53EP0 1204 aaKnown RBP6.34□□□□□ -1.39
CCSER1-202ENST00000502478 KANSL1Q7Z3B3 1105 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 NPM2Q86SE8 214 aaKnown RBP6.34□□□□□ -1.39
CCSER1-202ENST00000502478 CMTM4Q8IZR5 234 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 LILRB2Q8N423 598 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 MB21D1Q8N884 522 aa6.34□□□□□ -1.39
CCSER1-202ENST00000502478 ARL8AQ96BM9 186 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms