RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 CALML4Q96GE6 196 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 CLIC6Q96NY7 704 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 YME1L1Q96TA2 773 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 RAD9AQ99638 391 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 ADAM2Q99965 735 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 CSRNP2Q9H175 543 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 POLR3FQ9H1D9 316 aaPredicted RBP8.11□□□□□ -1.11
USP46-203ENST00000502443 TSPYL2Q9H2G4 693 aaPredicted RBP8.11□□□□□ -1.11
USP46-203ENST00000502443 SEMA6BQ9H3T3 888 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 ZNF576Q9H609 170 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 IFT122Q9HBG6 1241 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 GPRC5CQ9NQ84 441 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 FBXO2Q9UK22 296 aaPredicted RBP8.11□□□□□ -1.11
USP46-203ENST00000502443 INSL6Q9Y581 213 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 SRPRBQ9Y5M8 271 aaKnown RBP8.11□□□□□ -1.11
USP46-203ENST00000502443 TTC3P53804 2025 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 TMEM265A0A087WTH1 108 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 LCHNA4D1U4 455 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 SPTLC2O15270 562 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 SLC26A4O43511 780 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 GLRA2P23416 452 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 PHKA2P46019 1235 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 NASPP49321 788 aaPredicted RBP8.1□□□□□ -1.11
USP46-203ENST00000502443 PPP2R2DQ66LE6 453 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 FAM43BQ6ZT52 329 aaPredicted RBP8.1□□□□□ -1.11
USP46-203ENST00000502443 SLC24A5Q71RS6 500 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 CATSPER4Q7RTX7 472 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 KCNK18Q7Z418 384 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 SRGAP1Q7Z6B7 1085 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 KCTD17Q8N5Z5 321 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 KRI1Q8N9T8 703 aaKnown RBP8.1□□□□□ -1.11
USP46-203ENST00000502443 LINC00301Q8NCQ3 95 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 ASAP3Q8TDY4 903 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 LINC01599Q8WXQ3 324 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 EPSTI1Q96J88 318 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 PNMA5Q96PV4 448 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 CCSER1Q9C0I3 900 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 TTYH1Q9H313 450 aaPredicted RBP8.1□□□□□ -1.11
USP46-203ENST00000502443 MINDY3Q9H8M7 445 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 POLD4Q9HCU8 107 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 RGS18Q9NS28 235 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 C1orf112Q9NSG2 853 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 CFAP45Q9UL16 551 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 LRFN2Q9ULH4 789 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 ZDHHC9Q9Y397 364 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 PCDHB7Q9Y5E2 793 aa8.1□□□□□ -1.11
USP46-203ENST00000502443 SZT2Q5T011 3432 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 LRRIQ4A6NIV6 560 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 C9IYK1 514 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 INO80B-WBP1J3KQ70 363 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 ERLIN2O94905 339 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 YEATS4O95619 227 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 BRD1O95696 1058 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 PLA2G4BP0C869 781 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 STAG3L1P0CL83 205 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 PLCG1P19174 1290 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 NCLP19338 710 aaKnown RBP8.09□□□□□ -1.11
USP46-203ENST00000502443 TXLNAP40222 546 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 SARSP49591 514 aaKnown RBP8.09□□□□□ -1.11
USP46-203ENST00000502443 PTENP60484 403 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 HTRA4P83105 476 aaPredicted RBP8.09□□□□□ -1.11
USP46-203ENST00000502443 DNM1Q05193 864 aaKnown RBP8.09□□□□□ -1.11
USP46-203ENST00000502443 POU5F1BQ06416 359 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 RAD51AP2Q09MP3 1159 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 CAPSQ13938 189 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 DHX8Q14562 1220 aaKnown RBP8.09□□□□□ -1.11
USP46-203ENST00000502443 DSC3Q14574 896 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 KARSQ15046 597 aaKnown RBP8.09□□□□□ -1.11
USP46-203ENST00000502443 PPP2R5AQ15172 486 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 TMEM119Q4V9L6 283 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 ATL3Q6DD88 541 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 RINT1Q6NUQ1 792 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 C1orf186Q6ZWK4 172 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 USP49Q70CQ1 688 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 NPAS4Q8IUM7 802 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 SYT2Q8N9I0 419 aaPredicted RBP8.09□□□□□ -1.11
USP46-203ENST00000502443 SYMPKQ92797 1274 aaKnown RBP8.09□□□□□ -1.11
USP46-203ENST00000502443 KIFAP3Q92845 792 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 IFT74Q96LB3 600 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 RUSC1Q9BVN2 902 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 CERS4Q9HA82 394 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 CHST12Q9NRB3 414 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 RNF216Q9NWF9 866 aaPredicted RBP8.09□□□□□ -1.11
USP46-203ENST00000502443 MTMR10Q9NXD2 777 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 DACT1Q9NYF0 836 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 CCDC39Q9UFE4 941 aa8.09□□□□□ -1.11
USP46-203ENST00000502443 PIN4Q9Y237 131 aaKnown RBP8.09□□□□□ -1.11
USP46-203ENST00000502443 MORC2Q9Y6X9 1032 aaPredicted RBP8.09□□□□□ -1.11
USP46-203ENST00000502443 CUTAO60888 179 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 HIP1RO75146 1068 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 PPP6R2O75170 966 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 DGKIO75912 1065 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 ARHGEF15O94989 841 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 NAMPTP43490 491 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 ME1P48163 572 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 SLC12A3P55017 1021 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 TAP1Q03518 808 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 NCBP1Q09161 790 aaKnown RBP8.08□□□□□ -1.12
USP46-203ENST00000502443 MCM6Q14566 821 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 GRIN2CQ14957 1233 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms