RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	NLRP4	Q96MN2	994 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	ATP6V0A4	Q9HBG4	840 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	TRANK1	O15050	2925 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658		A0A087WZ62	844 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658		C9IYK1	514 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	RB1	P06400	928 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	CCT6A	P40227	531 aa	Known RBP	11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	PHKA2	P46019	1235 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	FAM189B	P81408	668 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	ATP2C1	P98194	919 aa	Predicted RBP	11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	LAMTOR4	Q0VGL1	99 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	NBR1	Q14596	966 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	KRT79	Q5XKE5	535 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	FERMT3	Q86UX7	667 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	HSCB	Q8IWL3	235 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	CRIPAK	Q8N1N5	446 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	FBXO22	Q8NEZ5	403 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	PIGO	Q8TEQ8	1089 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	TMEM143	Q96AN5	459 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	ZNF689	Q96CS4	500 aa	Predicted RBP	11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	PLVAP	Q9BX97	442 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	CERS4	Q9HA82	394 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	TMEM161A	Q9NX61	479 aa		11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	DAXX	Q9UER7	740 aa	Predicted RBP	11.7	□□□□□ -0.54
FXR1-222	ENST00000498658	VPS37C	A5D8V6	355 aa	Predicted RBP	11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	ARHGEF35	A5YM69	484 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	ZBTB39	O15060	712 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	MED24	O75448	989 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	EOMES	O95936	686 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	HSP90AA1	P07900	732 aa	Known RBP	11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	SRGAP2C	P0DJJ0	459 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	ADGRE1	Q14246	886 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	DSC3	Q14574	896 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	PTPRO	Q16827	1216 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	EPC2	Q52LR7	807 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	NAALADL2	Q58DX5	795 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	CATSPER4	Q7RTX7	472 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	TMEM192	Q8IY95	271 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	ZNF579	Q8NAF0	562 aa	Known RBP	11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	SLC17A8	Q8NDX2	589 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	SNX29	Q8TEQ0	813 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	CLP1	Q92989	425 aa	Known RBP	11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	AK8	Q96MA6	479 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	TRAIP	Q9BWF2	469 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	RC3H2	Q9HBD1	1191 aa	Known RBP	11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	AAAS	Q9NRG9	546 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	ARID2	Q68CP9	1835 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658	EYS	Q5T1H1	3165 aa		11.69	□□□□□ -0.54
FXR1-222	ENST00000498658		A0A0U1RQF3	1178 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	C5orf67	F2Z3F1	127 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	SLC26A4	O43511	780 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	MGEA5	O60502	916 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	ARHGEF15	O94989	841 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	ARL2	P36404	184 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	BMPR1A	P36894	532 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	RAB27A	P51159	221 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	GRB10	Q13322	594 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	POTEG	Q6S5H5	508 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	KSR1	Q8IVT5	923 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	ABI1	Q8IZP0	508 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	RNF149	Q8NC42	400 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	ZNF668	Q96K58	619 aa	Predicted RBP	11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	C17orf80	Q9BSJ5	609 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	NFKBIZ	Q9BYH8	718 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	NT5C3A	Q9H0P0	336 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	IFT122	Q9HBG6	1241 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	MTUS1	Q9ULD2	1270 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	KIAA1024	Q9UPX6	916 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	DNM3	Q9UQ16	869 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	PIN4	Q9Y237	131 aa	Known RBP	11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	MTCH2	Q9Y6C9	303 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	RALGAPA2	Q2PPJ7	1873 aa		11.68	□□□□□ -0.54
FXR1-222	ENST00000498658	CARNS1	A5YM72	827 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658		H3BNC9	293 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	USO1	O60763	962 aa	Known RBP	11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	ERLIN2	O94905	339 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	CHRM1	P11229	460 aa	Predicted RBP	11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	CYP11B2	P19099	503 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	SYT1	P21579	422 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	AXL	P30530	894 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	CTNNB1	P35222	781 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	PTEN	P60484	403 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	PPP2R5A	Q15172	486 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	CSPP1	Q1MSJ5	1256 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	TWF2	Q6IBS0	349 aa	Known RBP	11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	PADI6	Q6TGC4	694 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	ECHDC2	Q86YB7	292 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	P2RX5	Q93086	422 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	TMEM117	Q9H0C3	514 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	LMAN2L	Q9H0V9	348 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	XPNPEP1	Q9NQW7	623 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	AGPAT5	Q9NUQ2	364 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	DDX19A	Q9NUU7	478 aa	Known RBP	11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	KCNG1	Q9UIX4	513 aa		11.67	□□□□□ -0.54
FXR1-222	ENST00000498658	VWA3A	A6NCI4	1184 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	EPOP	A6NHQ4	379 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms