RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 EPCAMP16422 314 aa16.6■□□□□ 0.25
TRAF4-212ENST00000498540 CIITAP33076 1130 aa16.6■□□□□ 0.25
TRAF4-212ENST00000498540 ALDH7A1P49419 539 aaKnown RBP16.6■□□□□ 0.25
TRAF4-212ENST00000498540 KIAA1841Q6NSI8 718 aa16.6■□□□□ 0.25
TRAF4-212ENST00000498540 ZNF710Q8N1W2 664 aa16.6■□□□□ 0.25
TRAF4-212ENST00000498540 NLRP7Q8WX94 980 aa16.6■□□□□ 0.25
TRAF4-212ENST00000498540 TMEM169Q96HH4 297 aa16.6■□□□□ 0.25
TRAF4-212ENST00000498540 C6orf50Q9HD87 102 aa16.6■□□□□ 0.25
TRAF4-212ENST00000498540 DISC1Q9NRI5 854 aa16.6■□□□□ 0.25
TRAF4-212ENST00000498540 LIMD1Q9UGP4 676 aa16.6■□□□□ 0.25
TRAF4-212ENST00000498540 VPS13AQ96RL7 3174 aa16.6■□□□□ 0.25
TRAF4-212ENST00000498540 PTPRZ1P23471 2315 aaPredicted RBP16.59■□□□□ 0.25
TRAF4-212ENST00000498540 DMDP11532 3685 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 C2orf16Q68DN1 1984 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 PRR23AA6NEV1 266 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 CHMP2AO43633 222 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 EDIL3O43854 480 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 NBL1P41271 181 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 RCAN1P53805 252 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 TBC1D8BQ0IIM8 1120 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 LONRF3Q496Y0 759 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 ASTLQ6HA08 431 aaPredicted RBP16.59■□□□□ 0.25
TRAF4-212ENST00000498540 ZDHHC14Q8IZN3 488 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 BCL7CQ8WUZ0 217 aaPredicted RBP16.59■□□□□ 0.25
TRAF4-212ENST00000498540 LPPQ93052 612 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 GJA10Q969M2 543 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 NRBP2Q9NSY0 501 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 DZANK1Q9NVP4 752 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 DACT1Q9NYF0 836 aa16.59■□□□□ 0.25
TRAF4-212ENST00000498540 DBR1Q9UK59 544 aaKnown RBP16.59■□□□□ 0.25
TRAF4-212ENST00000498540 RIF1Q5UIP0 2472 aaKnown RBP16.59■□□□□ 0.25
TRAF4-212ENST00000498540 MEIS3P2A8K0S8 358 aa16.58■□□□□ 0.24
TRAF4-212ENST00000498540 MSH4O15457 936 aa16.58■□□□□ 0.24
TRAF4-212ENST00000498540 CTSAP10619 480 aa16.58■□□□□ 0.24
TRAF4-212ENST00000498540 CPA1P15085 419 aa16.58■□□□□ 0.24
TRAF4-212ENST00000498540 PHKA2P46019 1235 aa16.58■□□□□ 0.24
TRAF4-212ENST00000498540 TARBP2Q15633 366 aaKnown RBP16.58■□□□□ 0.24
TRAF4-212ENST00000498540 TSGA10IPQ3SY00 556 aa16.58■□□□□ 0.24
TRAF4-212ENST00000498540 MCTP2Q6DN12 878 aa16.58■□□□□ 0.24
TRAF4-212ENST00000498540 CCDC12Q8WUD4 166 aaPredicted RBP16.58■□□□□ 0.24
TRAF4-212ENST00000498540 SLC22A17Q8WUG5 538 aa16.58■□□□□ 0.24
TRAF4-212ENST00000498540 IRAK3Q9Y616 596 aa16.58■□□□□ 0.24
TRAF4-212ENST00000498540 FAM186AA6NE01 2351 aa16.58■□□□□ 0.24
TRAF4-212ENST00000498540 TMEM150BA6NC51 233 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 GAS7O60861 476 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 BMS1Q14692 1282 aaKnown RBP16.57■□□□□ 0.24
TRAF4-212ENST00000498540 ATAT1Q5SQI0 421 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 CWF19L1Q69YN2 538 aaKnown RBP16.57■□□□□ 0.24
TRAF4-212ENST00000498540 TMC5Q6UXY8 1006 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 DDX53Q86TM3 631 aaKnown RBP16.57■□□□□ 0.24
TRAF4-212ENST00000498540 TMEM87AQ8NBN3 555 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 IGSF21Q96ID5 467 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 VN1R3Q9BXE9 311 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 UNC45AQ9H3U1 944 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 MFSD1Q9H3U5 465 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 NRDE2Q9H7Z3 1164 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 TBC1D13Q9NVG8 400 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 USTQ9Y2C2 406 aa16.57■□□□□ 0.24
TRAF4-212ENST00000498540 NID2Q14112 1375 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 A0A087WZ62 844 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 B4GALT3O60512 393 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 GALTP07902 379 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 GNA11P29992 359 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 POLGP54098 1239 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-212ENST00000498540 MTERF2Q49AM1 385 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 LRCH2Q5VUJ6 765 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 TWF2Q6IBS0 349 aaKnown RBP16.56■□□□□ 0.24
TRAF4-212ENST00000498540 FRMD5Q7Z6J6 570 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 CABP7Q86V35 215 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 PLCD3Q8N3E9 789 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 SLC5A5Q92911 643 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 PHKBQ93100 1093 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 CCDC136Q96JN2 1154 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 CEP89Q96ST8 783 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 RIT2Q99578 217 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 SH2D3AQ9BRG2 576 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 FDXACB1Q9BRP7 624 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-212ENST00000498540 TRAIPQ9BWF2 469 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 GCOM2Q9BZD3 368 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-212ENST00000498540 CHST12Q9NRB3 414 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 DNAJB4Q9UDY4 337 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 SEPT9Q9UHD8 586 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-212ENST00000498540 INPP5FQ9Y2H2 1132 aa16.56■□□□□ 0.24
TRAF4-212ENST00000498540 CCDC196A0A1B0GTZ2 297 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
TRAF4-212ENST00000498540 STBD1O95210 358 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 SFNP31947 248 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 CLCN5P51795 746 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 JAK3P52333 1124 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 FGD1P98174 961 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 GIT2Q14161 759 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 PTPN14Q15678 1187 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 NOMO2Q5JPE7 1267 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 GLB1LQ6UWU2 654 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 SKAP1Q86WV1 359 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 FLCNQ8NFG4 579 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 TEKT3Q9BXF9 490 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 GBP3Q9H0R5 595 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 CYP26B1Q9NR63 512 aa16.55■□□□□ 0.24
TRAF4-212ENST00000498540 FAM105AQ9NUU6 356 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms