RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 RCAN1P53805 252 aa18.14■□□□□ 0.49
MUC1-220ENST00000498431 LONRF3Q496Y0 759 aa18.14■□□□□ 0.49
MUC1-220ENST00000498431 UBALD2Q8IYN6 164 aa18.14■□□□□ 0.49
MUC1-220ENST00000498431 VPS52Q8N1B4 723 aa18.14■□□□□ 0.49
MUC1-220ENST00000498431 NLRP7Q8WX94 980 aa18.14■□□□□ 0.49
MUC1-220ENST00000498431 LPPQ93052 612 aa18.14■□□□□ 0.49
MUC1-220ENST00000498431 NECTIN4Q96NY8 510 aa18.14■□□□□ 0.49
MUC1-220ENST00000498431 ZBP1Q9H171 429 aa18.14■□□□□ 0.49
MUC1-220ENST00000498431 DCHS1Q96JQ0 3298 aa18.14■□□□□ 0.49
MUC1-220ENST00000498431 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.13■□□□□ 0.49
MUC1-220ENST00000498431 TMEM150BA6NC51 233 aa18.13■□□□□ 0.49
MUC1-220ENST00000498431 MEIS3P2A8K0S8 358 aa18.13■□□□□ 0.49
MUC1-220ENST00000498431 ZC3H11AO75152 810 aaKnown RBP eCLIP18.13■□□□□ 0.49
MUC1-220ENST00000498431 EPCAMP16422 314 aa18.13■□□□□ 0.49
MUC1-220ENST00000498431 ALDH7A1P49419 539 aaKnown RBP18.13■□□□□ 0.49
MUC1-220ENST00000498431 BCL7CQ8WUZ0 217 aaPredicted RBP18.13■□□□□ 0.49
MUC1-220ENST00000498431 PHKBQ93100 1093 aa18.13■□□□□ 0.49
MUC1-220ENST00000498431 UNC45AQ9H3U1 944 aa18.13■□□□□ 0.49
MUC1-220ENST00000498431 NRBP2Q9NSY0 501 aa18.13■□□□□ 0.49
MUC1-220ENST00000498431 DENND4AQ7Z401 1863 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 MTHFRP42898 656 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 PHKA2P46019 1235 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 TBC1D8BQ0IIM8 1120 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 TARBP2Q15633 366 aaKnown RBP18.12■□□□□ 0.49
MUC1-220ENST00000498431 MCTP2Q6DN12 878 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 ASCL5Q7RTU5 278 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 ZNF710Q8N1W2 664 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 TMEM169Q96HH4 297 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 CEP89Q96ST8 783 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 SH2D3AQ9BRG2 576 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 MRPL9Q9BYD2 267 aaKnown RBP18.12■□□□□ 0.49
MUC1-220ENST00000498431 IRF2BPLQ9H1B7 796 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 LIMD1Q9UGP4 676 aa18.12■□□□□ 0.49
MUC1-220ENST00000498431 PROB1E7EW31 1015 aa18.11■□□□□ 0.49
MUC1-220ENST00000498431 PRPF3O43395 683 aaKnown RBP18.11■□□□□ 0.49
MUC1-220ENST00000498431 B4GALT3O60512 393 aa18.11■□□□□ 0.49
MUC1-220ENST00000498431 NUBP1P53384 320 aa18.11■□□□□ 0.49
MUC1-220ENST00000498431 KIAA1841Q6NSI8 718 aa18.11■□□□□ 0.49
MUC1-220ENST00000498431 Q6ZUG5 572 aa18.11■□□□□ 0.49
MUC1-220ENST00000498431 TDRD5Q8NAT2 981 aaKnown RBP18.11■□□□□ 0.49
MUC1-220ENST00000498431 CCDC12Q8WUD4 166 aaPredicted RBP18.11■□□□□ 0.49
MUC1-220ENST00000498431 SLC22A17Q8WUG5 538 aa18.11■□□□□ 0.49
MUC1-220ENST00000498431 SLC5A5Q92911 643 aa18.11■□□□□ 0.49
MUC1-220ENST00000498431 BRF1Q92994 677 aa18.11■□□□□ 0.49
MUC1-220ENST00000498431 CCDC136Q96JN2 1154 aa18.11■□□□□ 0.49
MUC1-220ENST00000498431 VN1R3Q9BXE9 311 aa18.11■□□□□ 0.49
MUC1-220ENST00000498431 DACT1Q9NYF0 836 aa18.11■□□□□ 0.49
MUC1-220ENST00000498431 PTPRZ1P23471 2315 aaPredicted RBP18.11■□□□□ 0.49
MUC1-220ENST00000498431 NID2Q14112 1375 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 A0A087WZ62 844 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 CCDC196A0A1B0GTZ2 297 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 GAS7O60861 476 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 STBD1O95210 358 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 GNA11P29992 359 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 FGD1P98174 961 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 KRT32Q14532 448 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 MTERF2Q49AM1 385 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 BMP2KLQ5H9B9 411 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 LRCH2Q5VUJ6 765 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 ZDHHC14Q8IZN3 488 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 IGSF21Q96ID5 467 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 RIT2Q99578 217 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 FDXACB1Q9BRP7 624 aaPredicted RBP18.1■□□□□ 0.49
MUC1-220ENST00000498431 GCOM2Q9BZD3 368 aaPredicted RBP18.1■□□□□ 0.49
MUC1-220ENST00000498431 NRDE2Q9H7Z3 1164 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 TBC1D13Q9NVG8 400 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 DZANK1Q9NVP4 752 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 VPS54Q9P1Q0 977 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 DNAJB4Q9UDY4 337 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 SEPT9Q9UHD8 586 aaPredicted RBP18.1■□□□□ 0.49
MUC1-220ENST00000498431 DBR1Q9UK59 544 aaKnown RBP18.1■□□□□ 0.49
MUC1-220ENST00000498431 FRYLO94915 3013 aa18.1■□□□□ 0.49
MUC1-220ENST00000498431 RIF1Q5UIP0 2472 aaKnown RBP18.1■□□□□ 0.49
MUC1-220ENST00000498431 CTSAP10619 480 aa18.09■□□□□ 0.49
MUC1-220ENST00000498431 NTRK3Q16288 839 aa18.09■□□□□ 0.49
MUC1-220ENST00000498431 ASTLQ6HA08 431 aaPredicted RBP18.09■□□□□ 0.49
MUC1-220ENST00000498431 TWF2Q6IBS0 349 aaKnown RBP18.09■□□□□ 0.49
MUC1-220ENST00000498431 TMC5Q6UXY8 1006 aa18.09■□□□□ 0.49
MUC1-220ENST00000498431 DDX53Q86TM3 631 aaKnown RBP18.09■□□□□ 0.49
MUC1-220ENST00000498431 TEKT3Q9BXF9 490 aa18.09■□□□□ 0.49
MUC1-220ENST00000498431 CHST12Q9NRB3 414 aa18.09■□□□□ 0.49
MUC1-220ENST00000498431 PIN4Q9Y237 131 aaKnown RBP18.09■□□□□ 0.49
MUC1-220ENST00000498431 INPP5FQ9Y2H2 1132 aa18.09■□□□□ 0.49
MUC1-220ENST00000498431 IRAK3Q9Y616 596 aa18.09■□□□□ 0.49
MUC1-220ENST00000498431 IGKV6-21A0A0C4DH24 114 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 PRR23AA6NEV1 266 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 PSMD10O75832 226 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 GALTP07902 379 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 HMGB1P09429 215 aaKnown RBP18.08■□□□□ 0.48
MUC1-220ENST00000498431 SFNP31947 248 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 NBL1P41271 181 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 SLC11A1P49279 550 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 JAK3P52333 1124 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 POLGP54098 1239 aaPredicted RBP18.08■□□□□ 0.48
MUC1-220ENST00000498431 NOMO2Q5JPE7 1267 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 ATAT1Q5SQI0 421 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 KSR1Q8IVT5 923 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 BICD2Q8TD16 824 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 TRAIPQ9BWF2 469 aa18.08■□□□□ 0.48
MUC1-220ENST00000498431 NIFKQ9BYG3 293 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms