RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 XIRP2A4UGR9 3374 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 BRWD1Q9NSI6 2320 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 WNT7AO00755 349 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 NCK2O43639 380 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 CSDE1O75534 798 aaKnown RBP9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 SFPQP23246 707 aaKnown RBP eCLIP9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 YWHABP31946 246 aaKnown RBP9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 RFC5P40937 340 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 GUCY1B3Q02153 619 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 CAMK1Q14012 370 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 CTTNQ14247 550 aaKnown RBP9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 OTUD6AQ7L8S5 288 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 ECHDC2Q86YB7 292 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 ABI1Q8IZP0 508 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 SPPL3Q8TCT6 385 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 POF1BQ8WVV4 589 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 C8orf76Q96K31 380 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 NLRP4Q96MN2 994 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 KIF2CQ99661 725 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 TMEM117Q9H0C3 514 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 DHX33Q9H6R0 707 aaKnown RBP9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 ZSWIM4Q9H7M6 989 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 TTC12Q9H892 705 aaPredicted RBP9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 SH2B1Q9NRF2 756 aaPredicted RBP9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 TYW1Q9NV66 732 aaKnown RBP9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 CLDND1Q9NY35 253 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 DACT1Q9NYF0 836 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 RGL1Q9NZL6 768 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 MYO7AQ13402 2215 aa9.48□□□□□ -0.89
HMGXB4-207ENST00000498212 A0A0U1RQF3 1178 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 GAS2O43903 313 aaKnown RBP9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 EOMESO95936 686 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 LAG3P18627 525 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 ATP2B1P20020 1258 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 DNAJB1P25685 340 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 TXKP42681 527 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 RBM25P49756 843 aaKnown RBP9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 HMGN5P82970 282 aaKnown RBP9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 HYAL1Q12794 435 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 COL19A1Q14993 1142 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 CSPP1Q1MSJ5 1256 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 XKR9Q5GH70 373 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 PTCRAQ6ISU1 281 aaPredicted RBP9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 POTEGQ6S5H5 508 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 KSR1Q8IVT5 923 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 TPH2Q8IWU9 490 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 THNSL1Q8IYQ7 743 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 FAM184AQ8NB25 1140 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 COLGALT1Q8NBJ5 622 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 RNF169Q8NCN4 708 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 NEK9Q8TD19 979 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 PSPC1Q8WXF1 523 aaKnown RBP9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 PPP2R3CQ969Q6 453 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 TMEM143Q96AN5 459 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 CASD1Q96PB1 797 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 MTRQ99707 1265 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 EIF2AK1Q9BQI3 630 aaKnown RBP9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 CWH43Q9H720 699 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 CHST12Q9NRB3 414 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 BMP2KQ9NSY1 1161 aaPredicted RBP9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 RNF19AQ9NV58 838 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 HCSTQ9UBK5 93 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 PIN4Q9Y237 131 aaKnown RBP9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 COL4A3BPQ9Y5P4 624 aa9.47□□□□□ -0.89
HMGXB4-207ENST00000498212 SPTBN5Q9NRC6 3674 aaKnown RBP9.46□□□□□ -0.89
HMGXB4-207ENST00000498212 H3BQ06 376 aaPredicted RBP9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 ZBTB39O15060 712 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 ASAP2O43150 1006 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 FGF18O76093 207 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 SLITRK3O94933 977 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 LYPLA2O95372 231 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 SKIP12755 728 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 IL9P15248 144 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 ATF7P17544 494 aaPredicted RBP9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 MCM7P33993 719 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 IRS1P35568 1242 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 PHKA2P46019 1235 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 UBE3AQ05086 875 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 GNL2Q13823 731 aaKnown RBP9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 EMC2Q15006 297 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 CTC1Q2NKJ3 1217 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 PUS10Q3MIT2 529 aaKnown RBP9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 CLLU1OSQ5K130 101 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 TWF2Q6IBS0 349 aaKnown RBP9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 LRRC55Q6ZSA7 311 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 CATSPER4Q7RTX7 472 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 SRGAP1Q7Z6B7 1085 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 ZNF598Q86UK7 904 aaKnown RBP9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 LRRC43Q8N309 656 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 TCP11Q8WWU5 503 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 CCDC43Q96MW1 224 aaKnown RBP9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 MTMR9Q96QG7 549 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 HSD17B14Q9BPX1 270 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 TRAIPQ9BWF2 469 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 TMEM60Q9H2L4 133 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 FOXP1Q9H334 677 aaPredicted RBP9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 IGFLR1Q9H665 355 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 IFT122Q9HBG6 1241 aa9.46□□□□□ -0.9
HMGXB4-207ENST00000498212 TLR9Q9NR96 1032 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms