RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 TGFB1I1O43294 461 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 ZSCAN12O43309 604 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 STBD1O95210 358 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 ATG7O95352 703 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 AFPP02771 609 aaKnown RBP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 FECHP22830 423 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 RFC5P40937 340 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 SMTNP53814 917 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 TSR1Q2NL82 804 aaKnown RBP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 ZNF792Q3KQV3 632 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 FIGNQ5HY92 759 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 CELF3Q5SZQ8 465 aaKnown RBP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 E4F1Q66K89 784 aaPredicted RBP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 RGMBQ6NW40 437 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 HAUS6Q7Z4H7 955 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 PLEKHH3Q7Z736 793 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 TRIM50Q86XT4 487 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 DHX37Q8IY37 1157 aaKnown RBP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 NEK11Q8NG66 645 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 SLC7A3Q8WY07 619 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 SEPT1Q8WYJ6 367 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 BSNDQ8WZ55 320 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 IFT74Q96LB3 600 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 SPATA33Q96N06 139 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 MKNK1Q9BUB5 465 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 KIFC3Q9BVG8 833 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 STRA6Q9BX79 667 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 IKZF4Q9H2S9 585 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 ST6GALNAC4Q9H4F1 302 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 C17orf75Q9HAS0 396 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 KCND1Q9NSA2 647 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 FAM207AQ9NSI2 230 aaPredicted RBP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 TRMT1Q9NXH9 659 aaKnown RBP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 CGNQ9P2M7 1197 aaKnown RBP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 DDX41Q9UJV9 622 aaKnown RBP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 EXOC7Q9UPT5 735 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 FRMD4BQ9Y2L6 1034 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 LUC7L2Q9Y383 392 aaKnown RBP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 ADGRA3Q8IWK6 1321 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 PASKQ96RG2 1323 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 DENND3A2RUS2 1198 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 GOLGA6L9A6NEM1 432 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 KIF2AO00139 706 aaPredicted RBP8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 STRNO43815 780 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 EXOC3O60645 756 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 LGR5O75473 907 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 AKAP3O75969 853 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 CCDC175P0C221 793 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 TXNP10599 105 aaKnown RBP8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 MARK3P27448 753 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 ABCD1P33897 745 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 PSMC2P35998 433 aaKnown RBP8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 NPTX2P47972 431 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 CASP4P49662 377 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 STAT5BP51692 787 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 SOX10P56693 466 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 RTP1P59025 263 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 ZBED6P86452 979 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 GTF2BQ00403 316 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 MYL7Q01449 175 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 PPP2R5AQ15172 486 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 CYP26C1Q6V0L0 522 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 TOGARAM2Q6ZUX3 1019 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 DPP9Q86TI2 863 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 TMTC1Q8IUR5 882 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 MAP4K3Q8IVH8 894 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 C12orf56Q8IXR9 622 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 ZNF397Q8NF99 534 aaPredicted RBP8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 GLG1Q92896 1179 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 COPS5Q92905 334 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 BICD1Q96G01 975 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 PCYT2Q99447 389 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 DNAJC7Q99615 494 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 GPR20Q99678 358 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 PTPN18Q99952 460 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 DESI2Q9BSY9 194 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 MMRN2Q9H8L6 949 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 ZNHIT6Q9NWK9 470 aaKnown RBP8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 GCNT4Q9P109 453 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 CPA4Q9UI42 421 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 CAPN11Q9UMQ6 739 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 DIS3Q9Y2L1 958 aaKnown RBP8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 PPP2R2CQ9Y2T4 447 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 BOLA1Q9Y3E2 137 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 PPME1Q9Y570 386 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 SRCAPQ6ZRS2 3230 aa8.84□□□□□ -0.99
PDZRN3-212ENST00000498048 TDRD15B5MCY1 1934 aaKnown RBP8.84□□□□□ -1
PDZRN3-212ENST00000498048 SLC15A5A6NIM6 579 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 LRRIQ4A6NIV6 560 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 HNRNPDLO14979 420 aaKnown RBP8.83□□□□□ -1
PDZRN3-212ENST00000498048 GAS2O43903 313 aaKnown RBP8.83□□□□□ -1
PDZRN3-212ENST00000498048 GH1P01241 217 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 KRT13P13646 458 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 TNNT1P13805 278 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 ATP4AP20648 1035 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 SNRPFP62306 86 aaKnown RBP8.83□□□□□ -1
PDZRN3-212ENST00000498048 ARHGAP1Q07960 439 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 SREBF2Q12772 1141 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms