RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 SCYL3Q8IZE3 742 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 RDH13Q8NBN7 331 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 ACAD9Q9H845 621 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 TBC1D22BQ9NU19 505 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 PCDHAC2Q9Y5I4 1007 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 MEIS2O14770 477 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 OPA1O60313 960 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 P4HBP07237 508 aaKnown RBP8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 MUTP22033 750 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 CIITAP33076 1130 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 MEA1Q16626 185 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 TWF2Q6IBS0 349 aaKnown RBP8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 ACCSQ96QU6 501 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 FNBP1Q96RU3 617 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 GINM1Q9NU53 330 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 KCND2Q9NZV8 630 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 ADAMTS1Q9UHI8 967 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 A0A1W2PRG0 241 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 SLURP2P0DP57 97 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 GCLCP48506 637 aaPredicted RBP8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 CLK2P49760 499 aaKnown RBP8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 SPDYE2Q495Y8 402 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 CEP57Q86XR8 500 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 IFT20Q8IY31 132 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 U2AF1L4Q8WU68 220 aaKnown RBP8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 SYN2Q92777 582 aaPredicted RBP8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 NLRP4Q96MN2 994 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 RIT2Q99578 217 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 GCNT4Q9P109 453 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 ODF2LQ9ULJ1 636 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 SCN7AQ01118 1682 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 IRF6O14896 467 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 SLC16A3O15427 465 aaKnown RBP8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 CTNND1O60716 968 aaKnown RBP8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 PGK2P07205 417 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 CYP3A4P08684 503 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 GRK4P32298 578 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 SH3TC2Q8TF17 1288 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 ZC3H15Q8WU90 426 aaKnown RBP8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 SEPT9Q9UHD8 586 aaPredicted RBP8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 BTAF1O14981 1849 aa8.67□□□□□ -1.02
HLA-DMB-262ENST00000498020 ASB14A6NK59 587 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 MMP14P50281 582 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 PLCB3Q01970 1234 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 GIT2Q14161 759 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 PEX26Q7Z412 305 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 NECAB2Q7Z6G3 386 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 ZBTB8OSQ8IWT0 167 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 C7orf61Q8IZ16 206 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 GIMAP7Q8NHV1 300 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 FBF1Q8TES7 1133 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 SLC7A3Q8WY07 619 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 DNAJC19Q96DA6 116 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 VPS18Q9P253 973 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 DOCK2Q92608 1830 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 ATP1A1P05023 1023 aaKnown RBP8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 VIL1P09327 827 aaKnown RBP8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 C1orf228Q6PIY5 440 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 PADI6Q6TGC4 694 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 CATSPER4Q7RTX7 472 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 SCFD1Q8WVM8 642 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 ATG4CQ96DT6 458 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 LXNQ9BS40 222 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 EPC1Q9H2F5 836 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 DNAJC18Q9H819 358 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 TRIM10Q9UDY6 481 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 CASZ1Q86V15 1759 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 EIF3DO15371 548 aaKnown RBP eCLIP8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 FLT3LGP49771 235 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 MYL7Q01449 175 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 ARHGAP44Q17R89 818 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 FAM102BQ5T8I3 360 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 ATP6V0A1Q93050 837 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 CDHR1Q96JP9 859 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 MYO5AQ9Y4I1 1855 aaKnown RBP8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 FAM86B1E9PN63 330 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 H0YCG3 227 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 PIK3CDO00329 1044 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 CEP104O60308 925 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 FARP2O94887 1054 aaPredicted RBP8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 FAM86B2P0C5J1 330 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 SRGAP2CP0DJJ0 459 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 FECHP22830 423 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 CYP2C19P33261 490 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 JAK3P52333 1124 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 YARSP54577 528 aaKnown RBP8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 GFPT1Q06210 699 aaPredicted RBP8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 MTMR1Q13613 665 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 MTERF2Q49AM1 385 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 ALKBH5Q6P6C2 394 aaKnown RBP8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 RNF34Q969K3 372 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 SPATA33Q96N06 139 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 NAP1L3Q99457 506 aaPredicted RBP8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 MXRA8Q9BRK3 442 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 ABCB6Q9NP58 842 aa8.66□□□□□ -1.02
HLA-DMB-262ENST00000498020 SYN1P17600 705 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 QARSP47897 775 aaKnown RBP8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 FSTL1Q12841 308 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 RINT1Q6NUQ1 792 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms