RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 FGFR4P22455 802 aa17.1■□□□□ 0.33
NUP50-219ENST00000497960 GATMP50440 423 aa17.1■□□□□ 0.33
NUP50-219ENST00000497960 EMC2Q15006 297 aa17.1■□□□□ 0.33
NUP50-219ENST00000497960 SPOUT1Q5T280 376 aaKnown RBP17.1■□□□□ 0.33
NUP50-219ENST00000497960 TMEM143Q96AN5 459 aa17.1■□□□□ 0.33
NUP50-219ENST00000497960 LMAN2LQ9H0V9 348 aa17.1■□□□□ 0.33
NUP50-219ENST00000497960 CHST12Q9NRB3 414 aa17.1■□□□□ 0.33
NUP50-219ENST00000497960 BMP2KQ9NSY1 1161 aaPredicted RBP17.1■□□□□ 0.33
NUP50-219ENST00000497960 ANKEF1Q9NU02 776 aa17.1■□□□□ 0.33
NUP50-219ENST00000497960 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
NUP50-219ENST00000497960 POTEMA6NI47 508 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 ZBTB39O15060 712 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 ASAP2O43150 1006 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 CSDE1O75534 798 aaKnown RBP17.09■□□□□ 0.33
NUP50-219ENST00000497960 U2AF2P26368 475 aaKnown RBP eCLIP17.09■□□□□ 0.33
NUP50-219ENST00000497960 TECP42680 631 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 NAALADL2Q58DX5 795 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 MCTP1Q6DN14 999 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 CATSPER4Q7RTX7 472 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 ECHDC2Q86YB7 292 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 KSR1Q8IVT5 923 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 ABI1Q8IZP0 508 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 PRPF31Q8WWY3 499 aaKnown RBP17.09■□□□□ 0.33
NUP50-219ENST00000497960 MTRQ99707 1265 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 AAASQ9NRG9 546 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 UNC80Q8N2C7 3258 aa17.09■□□□□ 0.33
NUP50-219ENST00000497960 RALGAPA2Q2PPJ7 1873 aa17.08■□□□□ 0.33
NUP50-219ENST00000497960 NLRC5Q86WI3 1866 aa17.08■□□□□ 0.33
NUP50-219ENST00000497960 SRGAP2CP0DJJ0 459 aa17.08■□□□□ 0.32
NUP50-219ENST00000497960 FGFR1P11362 822 aa17.08■□□□□ 0.32
NUP50-219ENST00000497960 XRCC6P12956 609 aaKnown RBP eCLIP17.08■□□□□ 0.32
NUP50-219ENST00000497960 LAMTOR4Q0VGL1 99 aa17.08■□□□□ 0.32
NUP50-219ENST00000497960 RNF169Q8NCN4 708 aa17.08■□□□□ 0.32
NUP50-219ENST00000497960 P2RX5Q93086 422 aa17.08■□□□□ 0.32
NUP50-219ENST00000497960 TMEM117Q9H0C3 514 aa17.08■□□□□ 0.32
NUP50-219ENST00000497960 NSUN3Q9H649 340 aaKnown RBP17.08■□□□□ 0.32
NUP50-219ENST00000497960 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.32
NUP50-219ENST00000497960 TSHZ2Q9NRE2 1034 aa17.08■□□□□ 0.32
NUP50-219ENST00000497960 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
NUP50-219ENST00000497960 PCDHB12Q9Y5F1 795 aa17.08■□□□□ 0.32
NUP50-219ENST00000497960 TRANK1O15050 2925 aa17.08■□□□□ 0.32
NUP50-219ENST00000497960 NCOR1O75376 2440 aa17.07■□□□□ 0.32
NUP50-219ENST00000497960 A0A0U1RQF3 1178 aa17.07■□□□□ 0.32
NUP50-219ENST00000497960 GRM6O15303 877 aa17.07■□□□□ 0.32
NUP50-219ENST00000497960 DGAT1O75907 488 aa17.07■□□□□ 0.32
NUP50-219ENST00000497960 EOMESO95936 686 aa17.07■□□□□ 0.32
NUP50-219ENST00000497960 TFF2Q03403 129 aa17.07■□□□□ 0.32
NUP50-219ENST00000497960 MXD4Q14582 209 aaPredicted RBP17.07■□□□□ 0.32
NUP50-219ENST00000497960 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
NUP50-219ENST00000497960 SRGAP1Q7Z6B7 1085 aa17.07■□□□□ 0.32
NUP50-219ENST00000497960 FERMT3Q86UX7 667 aa17.07■□□□□ 0.32
NUP50-219ENST00000497960 IFT122Q9HBG6 1241 aa17.07■□□□□ 0.32
NUP50-219ENST00000497960 PLAGL2Q9UPG8 496 aa17.07■□□□□ 0.32
NUP50-219ENST00000497960 PIN4Q9Y237 131 aaKnown RBP17.07■□□□□ 0.32
NUP50-219ENST00000497960 SKIP12755 728 aa17.06■□□□□ 0.32
NUP50-219ENST00000497960 RARRES1P49788 294 aa17.06■□□□□ 0.32
NUP50-219ENST00000497960 TFDP1Q14186 410 aa17.06■□□□□ 0.32
NUP50-219ENST00000497960 TCEAL5Q5H9L2 206 aa17.06■□□□□ 0.32
NUP50-219ENST00000497960 CATSPER3Q86XQ3 398 aa17.06■□□□□ 0.32
NUP50-219ENST00000497960 KLHL23Q8NBE8 558 aa17.06■□□□□ 0.32
NUP50-219ENST00000497960 RNF149Q8NC42 400 aa17.06■□□□□ 0.32
NUP50-219ENST00000497960 PIGOQ8TEQ8 1089 aa17.06■□□□□ 0.32
NUP50-219ENST00000497960 NACC1Q96RE7 527 aa17.06■□□□□ 0.32
NUP50-219ENST00000497960 POLR3CQ9BUI4 534 aaPredicted RBP17.06■□□□□ 0.32
NUP50-219ENST00000497960 ALG13Q9NP73 1137 aaKnown RBP17.06■□□□□ 0.32
NUP50-219ENST00000497960 TYW1Q9NV66 732 aaKnown RBP17.06■□□□□ 0.32
NUP50-219ENST00000497960 ITGB1P05556 798 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 SPATA31C1P0DKV0 1188 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 LAG3P18627 525 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 SYT1P21579 422 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 PHKA2P46019 1235 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 NBR1Q14596 966 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 CSPP1Q1MSJ5 1256 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 HAUS3Q68CZ6 603 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 LRRC43Q8N309 656 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 TRAIPQ9BWF2 469 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 RAB34Q9BZG1 259 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 UBE2ZQ9H832 354 aaPredicted RBP17.05■□□□□ 0.32
NUP50-219ENST00000497960 XPNPEP1Q9NQW7 623 aa17.05■□□□□ 0.32
NUP50-219ENST00000497960 A0A087WWV3 80 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 NCK2O43639 380 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 STX6O43752 255 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 MED24O75448 989 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 CSPG5O95196 566 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 RPA1P27694 616 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 TOB1P50616 345 aaPredicted RBP17.04■□□□□ 0.32
NUP50-219ENST00000497960 FXR2P51116 673 aaKnown RBP eCLIP17.04■□□□□ 0.32
NUP50-219ENST00000497960 RAB27AP51159 221 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 KCNQ1P51787 676 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 PTGDRQ13258 359 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 ZNF598Q86UK7 904 aaKnown RBP17.04■□□□□ 0.32
NUP50-219ENST00000497960 THNSL1Q8IYQ7 743 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 C4orf32Q8N8J7 132 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 SPPL3Q8TCT6 385 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 ADAMTS19Q8TE59 1207 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 PPP2R3CQ969Q6 453 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 CASD1Q96PB1 797 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 AGPAT5Q9NUQ2 364 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms