RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 PPME1Q9Y570 386 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 IGKV6-21A0A0C4DH24 114 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 SFPQP23246 707 aaKnown RBP eCLIP18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 TECP42680 631 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 PTPN5P54829 565 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 SSRP1Q08945 709 aaKnown RBP18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 PLPP4Q5VZY2 271 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 CES5AQ6NT32 575 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 MIER3Q7Z3K6 550 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 SLC39A11Q8N1S5 342 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 FBXL6Q8N531 539 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 DAGLBQ8NCG7 672 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 VN1R2Q8NFZ6 395 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 TBCKQ8TEA7 893 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 ZNF274Q96GC6 653 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 RPGRIP1Q96KN7 1286 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 VPS54Q9P1Q0 977 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 PCDHGC5Q9Y5F6 944 aa18.95■□□□□ 0.62
TRAPPC3-207ENST00000497251 CPLX1O14810 134 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 ZNF623O75123 536 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 DEXIO95424 95 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 CPA1P15085 419 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 RAB27AP51159 221 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 POLGP54098 1239 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 ERICH6BQ5W0A0 696 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 B3GNT9Q6UX72 402 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 RUFY3Q7L099 469 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 MBOAT7Q96N66 472 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 UNC45AQ9H3U1 944 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 IRAK3Q9Y616 596 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 WDR81Q562E7 1941 aa18.94■□□□□ 0.62
TRAPPC3-207ENST00000497251 ADAMTS3O15072 1205 aa18.93■□□□□ 0.62
TRAPPC3-207ENST00000497251 EDIL3O43854 480 aa18.93■□□□□ 0.62
TRAPPC3-207ENST00000497251 CENPBP07199 599 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC3-207ENST00000497251 PTPN21Q16825 1174 aa18.93■□□□□ 0.62
TRAPPC3-207ENST00000497251 CLLU1OSQ5K130 101 aa18.93■□□□□ 0.62
TRAPPC3-207ENST00000497251 SYCE2Q6PIF2 218 aa18.93■□□□□ 0.62
TRAPPC3-207ENST00000497251 SKAP1Q86WV1 359 aa18.93■□□□□ 0.62
TRAPPC3-207ENST00000497251 TMEM169Q96HH4 297 aa18.93■□□□□ 0.62
TRAPPC3-207ENST00000497251 TM6SF1Q9BZW5 370 aa18.93■□□□□ 0.62
TRAPPC3-207ENST00000497251 ADAM7Q9H2U9 754 aa18.93■□□□□ 0.62
TRAPPC3-207ENST00000497251 ZSWIM6Q9HCJ5 1215 aa18.93■□□□□ 0.62
TRAPPC3-207ENST00000497251 CHMP2AO43633 222 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 MAFO75444 373 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 MTHFRP42898 656 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 PHKA2P46019 1235 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 PSMC5P62195 406 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 GLB1LQ6UWU2 654 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 UBALD2Q8IYN6 164 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 BLIDQ8IZY5 108 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 RNF169Q8NCN4 708 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 FAM20AQ96MK3 541 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 CEP89Q96ST8 783 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 DZANK1Q9NVP4 752 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 HCSTQ9UBK5 93 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 SEPT9Q9UHD8 586 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 CYP46A1Q9Y6A2 500 aa18.92■□□□□ 0.62
TRAPPC3-207ENST00000497251 WDFY4Q6ZS81 3184 aa18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 C2orf71A6NGG8 1288 aa18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 HIDE1A8MVS5 230 aa18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 GCFC2P16383 781 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 BCAR1P56945 870 aa18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 CCT2P78371 535 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 UGCGQ16739 394 aa18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 KRT25Q7Z3Z0 450 aa18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 TMEM87AQ8NBN3 555 aa18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 PGBD4Q96DM1 585 aa18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 RIPOR3Q96MK2 946 aa18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 NAP1L4Q99733 375 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 SUCLA2Q9P2R7 463 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 HCFC2Q9Y5Z7 792 aa18.91■□□□□ 0.62
TRAPPC3-207ENST00000497251 M0R2N6 131 aa18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 GAS2O43903 313 aaKnown RBP18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 STBD1O95210 358 aa18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 XBP1P17861 261 aa18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 NONOQ15233 471 aaKnown RBP eCLIP18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 PCBP1Q15365 356 aaKnown RBP eCLIP18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 MTERF2Q49AM1 385 aa18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 TWF2Q6IBS0 349 aaKnown RBP18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 DDX53Q86TM3 631 aaKnown RBP18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 PPFIBP1Q86W92 1011 aa18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 ETNPPLQ8TBG4 499 aa18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 HELQQ8TDG4 1101 aa18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 KANSL3Q9P2N6 904 aa18.9■□□□□ 0.62
TRAPPC3-207ENST00000497251 TBX3O15119 743 aa18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 CDKL5O76039 1030 aa18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 CXCL14O95715 111 aa18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 QARSP47897 775 aaKnown RBP18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 RBM10P98175 930 aaKnown RBP18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 PPP2R5CQ13362 524 aa18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 PPP4R3AQ6IN85 833 aa18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 PLCD3Q8N3E9 789 aa18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 SLC7A3Q8WY07 619 aa18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 ASIC4Q96FT7 647 aa18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 NCOA5Q9HCD5 579 aaKnown RBP18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 DDX25Q9UHL0 483 aaKnown RBP18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 USTQ9Y2C2 406 aa18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 PTPRZ1P23471 2315 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC3-207ENST00000497251 A0A087WZ62 844 aa18.88■□□□□ 0.61
TRAPPC3-207ENST00000497251 DDX11L8A8MPP1 907 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms