RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 DYDC2Q96IM9 177 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 HIST1H2AHQ96KK5 128 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 HIST1H2AJQ99878 128 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 TMEM168Q9H0V1 697 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 ZNF277Q9NRM2 450 aaPredicted RBP6.41□□□□□ -1.38
VPS36-206ENST00000497149 DPP7Q9UHL4 492 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 GPR45Q9Y5Y3 372 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 A0A0A6YYK5 440 aaPredicted RBP6.4□□□□□ -1.38
VPS36-206ENST00000497149 AKAP10O43572 662 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 NUAK1O60285 661 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 SNUPNO95149 360 aaKnown RBP6.4□□□□□ -1.38
VPS36-206ENST00000497149 CYP1A1P04798 512 aaPredicted RBP6.4□□□□□ -1.38
VPS36-206ENST00000497149 AGXTP21549 392 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 KCNQ1P51787 676 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 PPARAQ07869 468 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 SPIDRQ14159 915 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 ODF1Q14990 250 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 MUM1Q2TAK8 710 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 CCDC178Q5BJE1 867 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 TRIM68Q6AZZ1 485 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 CIAPIN1Q6FI81 312 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 TXNDC5Q8NBS9 432 aaKnown RBP6.4□□□□□ -1.38
VPS36-206ENST00000497149 ADAMTS17Q8TE56 1095 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 SSH1Q8WYL5 1049 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 SOX7Q9BT81 388 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 KATNBL1Q9H079 304 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 EVLQ9UI08 416 aaPredicted RBP6.4□□□□□ -1.38
VPS36-206ENST00000497149 LUC7L2Q9Y383 392 aaKnown RBP6.4□□□□□ -1.38
VPS36-206ENST00000497149 CDY2AQ9Y6F7 541 aa6.4□□□□□ -1.38
VPS36-206ENST00000497149 E2F8A0AVK6 867 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 XPOTO43592 962 aaKnown RBP6.39□□□□□ -1.39
VPS36-206ENST00000497149 OSMP13725 252 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 XPAP23025 273 aaPredicted RBP6.39□□□□□ -1.39
VPS36-206ENST00000497149 ETV4P43268 484 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 RECQLP46063 649 aaPredicted RBP6.39□□□□□ -1.39
VPS36-206ENST00000497149 CDK17Q00537 523 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 PIN1Q13526 163 aaPredicted RBP6.39□□□□□ -1.39
VPS36-206ENST00000497149 ACAP2Q15057 778 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 NFE2Q16621 373 aaPredicted RBP6.39□□□□□ -1.39
VPS36-206ENST00000497149 FAM26FQ5R3K3 315 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 TCERG1LQ5VWI1 586 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 GAREM2Q75VX8 874 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 IFNL2Q8IZJ0 200 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 TSPEARQ8WU66 669 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 JADE3Q92613 823 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 AJUBAQ96IF1 538 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 IFT122Q9HBG6 1241 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 POLR3BQ9NW08 1133 aaPredicted RBP6.39□□□□□ -1.39
VPS36-206ENST00000497149 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS36-206ENST00000497149 TCEAL9Q9UHQ7 104 aa6.39□□□□□ -1.39
VPS36-206ENST00000497149 C9orf118A6NHY6 69 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 NRP2O60462 931 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 ABLIM3O94929 683 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 PARNO95453 639 aaKnown RBP6.38□□□□□ -1.39
VPS36-206ENST00000497149 HMGCRP04035 888 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 STAT5BP51692 787 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 SLC5A3P53794 718 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 EFCAB2Q5VUJ9 269 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 LARP4Q71RC2 724 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS36-206ENST00000497149 ZNF761Q86XN6 746 aaPredicted RBP6.38□□□□□ -1.39
VPS36-206ENST00000497149 REXO1L1PQ8IX06 675 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 KLHL36Q8N4N3 616 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 CPA6Q8N4T0 437 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 PPP1R14CQ8TAE6 165 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 NKD2Q969F2 451 aaPredicted RBP6.38□□□□□ -1.39
VPS36-206ENST00000497149 WDR92Q96MX6 357 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 SLC2A13Q96QE2 648 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 FDXACB1Q9BRP7 624 aaPredicted RBP6.38□□□□□ -1.39
VPS36-206ENST00000497149 CARD11Q9BXL7 1154 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 OSBPL6Q9BZF3 934 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 BARX1Q9HBU1 254 aaPredicted RBP6.38□□□□□ -1.39
VPS36-206ENST00000497149 TCF7L1Q9HCS4 588 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 DNAI1Q9UI46 699 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 ADAM29Q9UKF5 820 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 VWA7Q9Y334 891 aa6.38□□□□□ -1.39
VPS36-206ENST00000497149 SEC24DO94855 1032 aaPredicted RBP6.37□□□□□ -1.39
VPS36-206ENST00000497149 SLURP1P55000 103 aa6.37□□□□□ -1.39
VPS36-206ENST00000497149 MAN2A1Q16706 1144 aa6.37□□□□□ -1.39
VPS36-206ENST00000497149 ANO4Q32M45 955 aa6.37□□□□□ -1.39
VPS36-206ENST00000497149 LCORQ96JN0 433 aaPredicted RBP6.37□□□□□ -1.39
VPS36-206ENST00000497149 TEKT5Q96M29 485 aa6.37□□□□□ -1.39
VPS36-206ENST00000497149 CAMKK2Q96RR4 588 aa6.37□□□□□ -1.39
VPS36-206ENST00000497149 CDH19Q9H159 772 aa6.37□□□□□ -1.39
VPS36-206ENST00000497149 ZIM2Q9NZV7 527 aa6.37□□□□□ -1.39
VPS36-206ENST00000497149 IP6K2Q9UHH9 426 aa6.37□□□□□ -1.39
VPS36-206ENST00000497149 ZNF180Q9UJW8 692 aa6.37□□□□□ -1.39
VPS36-206ENST00000497149 INVSQ9Y283 1065 aa6.37□□□□□ -1.39
VPS36-206ENST00000497149 ZDHHC9Q9Y397 364 aa6.37□□□□□ -1.39
VPS36-206ENST00000497149 ZSCAN20P17040 1043 aaPredicted RBP6.36□□□□□ -1.39
VPS36-206ENST00000497149 CSF2RBP32927 897 aa6.36□□□□□ -1.39
VPS36-206ENST00000497149 NRG3P56975 720 aa6.36□□□□□ -1.39
VPS36-206ENST00000497149 CD69Q07108 199 aa6.36□□□□□ -1.39
VPS36-206ENST00000497149 TMEM240Q5SV17 173 aa6.36□□□□□ -1.39
VPS36-206ENST00000497149 MBNL2Q5VZF2 373 aaKnown RBP6.36□□□□□ -1.39
VPS36-206ENST00000497149 KLHDC10Q6PID8 442 aa6.36□□□□□ -1.39
VPS36-206ENST00000497149 FMNL3Q8IVF7 1028 aa6.36□□□□□ -1.39
VPS36-206ENST00000497149 RTKN2Q8IZC4 609 aa6.36□□□□□ -1.39
VPS36-206ENST00000497149 FATE1Q969F0 183 aa6.36□□□□□ -1.39
VPS36-206ENST00000497149 GFM2Q969S9 779 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms