RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 KLHDC10Q6PID8 442 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 LRRTM3Q86VH5 581 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 KIF18BQ86Y91 864 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 GPR135Q8IZ08 494 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 NINJ1Q92982 152 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 TUBGCP5Q96RT8 1024 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 NELFAQ9H3P2 528 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 IFT57Q9NWB7 429 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 OXSMQ9NWU1 459 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 PLA2G3Q9NZ20 509 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 KCMF1Q9P0J7 381 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 CEP72Q9P209 647 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 ZKSCAN5Q9Y2L8 839 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 CYP27B1O15528 508 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 KPNA6O60684 536 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 H2AFYO75367 372 aaKnown RBP4.83□□□□□ -1.64
VPS26A-208ENST00000497022 F2P00734 622 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 ADCY7P51828 1080 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 NEK4P51957 841 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 HHEXQ03014 270 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 ADCY1Q08828 1119 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 FOXL1Q12952 345 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 DGKDQ16760 1214 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 PRAMEF9Q5VWM5 478 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 ESRP1Q6NXG1 681 aaKnown RBP4.83□□□□□ -1.64
VPS26A-208ENST00000497022 ADGRE4PQ86SQ3 457 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 NXPE1Q8N323 547 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 SHCBP1Q8NEM2 672 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 OR5AN1Q8NGI8 311 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 RABGGTAQ92696 567 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 LPPQ93052 612 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 GFM2Q969S9 779 aaKnown RBP4.83□□□□□ -1.64
VPS26A-208ENST00000497022 CLIP3Q96DZ5 547 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 AGO3Q9H9G7 860 aaKnown RBP4.83□□□□□ -1.64
VPS26A-208ENST00000497022 PARPBPQ9NWS1 579 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 H2AFY2Q9P0M6 372 aaPredicted RBP4.83□□□□□ -1.64
VPS26A-208ENST00000497022 DENND2AQ9ULE3 1009 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 GIT1Q9Y2X7 761 aa4.83□□□□□ -1.64
VPS26A-208ENST00000497022 MRPL42Q9Y6G3 142 aaKnown RBP4.83□□□□□ -1.64
VPS26A-208ENST00000497022 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 C2orf78A6NCI8 922 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 TMEM191CA6NGB0 347 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 FOXN1O15353 648 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 GAS7O60861 476 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 KRT4P19013 534 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 MSX2P35548 267 aaPredicted RBP4.82□□□□□ -1.64
VPS26A-208ENST00000497022 BCAR1P56945 870 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 ATP2C1P98194 919 aaPredicted RBP4.82□□□□□ -1.64
VPS26A-208ENST00000497022 DSG1Q02413 1049 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 COL10A1Q03692 680 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 RIN1Q13671 783 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 GRM7Q14831 915 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 MYBPC3Q14896 1274 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 CNNM4Q6P4Q7 775 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 JAZF1Q86VZ6 243 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 TMPRSS6Q8IU80 811 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 NIM1KQ8IY84 436 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 NKD2Q969F2 451 aaPredicted RBP4.82□□□□□ -1.64
VPS26A-208ENST00000497022 TOMM22Q9NS69 142 aa4.82□□□□□ -1.64
VPS26A-208ENST00000497022 REXO2Q9Y3B8 237 aaKnown RBP4.82□□□□□ -1.64
VPS26A-208ENST00000497022 ZNF891A8MT65 544 aaPredicted RBP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 CDC45O75419 566 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 PRPF6O94906 941 aaKnown RBP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 STAT3P40763 770 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 ADCY2Q08462 1091 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 SAFB2Q14151 953 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 ACAP1Q15027 740 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 PCBP1Q15365 356 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 CSRP2Q16527 193 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 CCDC142Q17RM4 750 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 DALRD3Q5D0E6 543 aaKnown RBP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 TIGD7Q6NT04 549 aaPredicted RBP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 Q6ZPA2 131 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 KANSL1Q7Z3B3 1105 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 BMP8AQ7Z5Y6 402 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 PHYKPLQ8IUZ5 450 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 DHX37Q8IY37 1157 aaKnown RBP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 ZZZ3Q8IYH5 903 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 THEMISQ8N1K5 641 aaPredicted RBP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 EFHBQ8N7U6 833 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 C7orf31Q8N865 590 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 CHTF18Q8WVB6 975 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 RTF1Q92541 710 aaKnown RBP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 RPGRQ92834 1020 aaKnown RBP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 SLC7A6OSQ96CW6 309 aaPredicted RBP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 DYDC2Q96IM9 177 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 FEZ1Q99689 392 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 TTPALQ9BTX7 342 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 HAPLN2Q9GZV7 340 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 SLC6A15Q9H2J7 730 aa4.81□□□□□ -1.64
VPS26A-208ENST00000497022 RBM8AQ9Y5S9 174 aaKnown RBP4.81□□□□□ -1.64
VPS26A-208ENST00000497022 ADRA1BP35368 520 aa4.8□□□□□ -1.64
VPS26A-208ENST00000497022 UNQ6494/PRO21346Q6UXR6 183 aa4.8□□□□□ -1.64
VPS26A-208ENST00000497022 KIAA0907Q7Z7F0 614 aaPredicted RBP4.8□□□□□ -1.64
VPS26A-208ENST00000497022 PPM1KQ8N3J5 372 aa4.8□□□□□ -1.64
VPS26A-208ENST00000497022 GCDHQ92947 438 aaPredicted RBP4.8□□□□□ -1.64
VPS26A-208ENST00000497022 WDR92Q96MX6 357 aa4.8□□□□□ -1.64
VPS26A-208ENST00000497022 MYL10Q9BUA6 226 aa4.8□□□□□ -1.64
VPS26A-208ENST00000497022 TARS2Q9BW92 718 aaKnown RBP4.8□□□□□ -1.64
VPS26A-208ENST00000497022 PITHD1Q9GZP4 211 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms