RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 ELAC2Q9BQ52 826 aaKnown RBP6.21□□□□□ -1.42
USF3-204ENST00000496826 BCL2L14Q9BZR8 327 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 RAB20Q9NX57 234 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 SOS2Q07890 1332 aaPredicted RBP6.21□□□□□ -1.42
USF3-204ENST00000496826 RGS16O15492 202 aaPredicted RBP6.21□□□□□ -1.42
USF3-204ENST00000496826 RGS2P41220 211 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 NLRP11P59045 1033 aaKnown RBP6.21□□□□□ -1.42
USF3-204ENST00000496826 MLECQ14165 292 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 NFE2L1Q14494 772 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 NDUFAF6Q330K2 333 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 KCTD21Q4G0X4 260 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 ANGPTL8Q6UXH0 198 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 CLMNQ96JQ2 1002 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 TRIM2Q9C040 744 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 GGNBP2Q9H3C7 697 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 MAST3O60307 1309 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 ZC3H11AO75152 810 aaKnown RBP eCLIP6.21□□□□□ -1.42
USF3-204ENST00000496826 PTGES3Q15185 160 aaKnown RBP6.21□□□□□ -1.42
USF3-204ENST00000496826 C8orf74Q6P047 294 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 THRSPQ92748 146 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 PNPLA8Q9NP80 782 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 SNRKQ9NRH2 765 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 LNPEPQ9UIQ6 1025 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 DOLKQ9UPQ8 538 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 BAIAP2Q9UQB8 552 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 ANGPT4Q9Y264 503 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 ERCC6Q03468 1493 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 WDR17Q8IZU2 1322 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 M0R129 80 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 SPIRE1Q08AE8 756 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 DMC1Q14565 340 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 MORF4L2Q15014 288 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 BEND5Q7L4P6 421 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 TRPV3Q8NET8 790 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 FATE1Q969F0 183 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 HPS3Q969F9 1004 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 HDAC6Q9UBN7 1215 aa6.21□□□□□ -1.42
USF3-204ENST00000496826 RUVBL2Q9Y230 463 aaKnown RBP6.21□□□□□ -1.42
USF3-204ENST00000496826 SYNGAP1Q96PV0 1343 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 TLDC2A0PJX2 215 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 TSPAN9O75954 239 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 KLHL18O94889 574 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 INHBAP08476 426 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 GMFBP60983 142 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 ITKQ08881 620 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 SNCBQ16143 134 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 TCP11X2Q5H9J9 407 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 DGKKQ5KSL6 1271 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 MYLPFQ96A32 169 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 ZFATQ9P243 1243 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 ALG6Q9Y672 507 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 CCDC18Q5T9S5 1454 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 CSPG5O95196 566 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 ZSCAN20P17040 1043 aaPredicted RBP6.2□□□□□ -1.42
USF3-204ENST00000496826 OLR1P78380 273 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 BNC1Q01954 994 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 PTPN20Q4JDL3 420 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 TTBK2Q6IQ55 1244 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 SMIM5Q71RC9 77 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 CIDECQ96AQ7 238 aaPredicted RBP6.2□□□□□ -1.42
USF3-204ENST00000496826 GPRASP2Q96D09 838 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 RDH8Q9NYR8 311 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 GRID2IPA4D2P6 1211 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 TRIM64CA6NLI5 447 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 INPP4BO15327 924 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 IL10P22301 178 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 PEX5P50542 639 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 PEX6Q13608 980 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 C1orf94Q6P1W5 598 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 YTHDF3Q7Z739 585 aaKnown RBP6.2□□□□□ -1.42
USF3-204ENST00000496826 CENPTQ96BT3 561 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 COQ7Q99807 217 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 ARHGEF10LQ9HCE6 1279 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 LIMA1Q9UHB6 759 aaKnown RBP6.2□□□□□ -1.42
USF3-204ENST00000496826 INVSQ9Y283 1065 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 SMIM22K7EJ46 135 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 PRKAR2BP31323 418 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 PLCD1P51178 756 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 GUCY2FP51841 1108 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 ACSM2AQ08AH3 577 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 FAM98BQ52LJ0 330 aaKnown RBP6.2□□□□□ -1.42
USF3-204ENST00000496826 BICRALQ6AI39 1079 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 EFL1Q7Z2Z2 1120 aaKnown RBP6.2□□□□□ -1.42
USF3-204ENST00000496826 ZBTB8OSQ8IWT0 167 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 KCNB2Q92953 911 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 REXO4Q9GZR2 422 aaKnown RBP6.2□□□□□ -1.42
USF3-204ENST00000496826 PPCSQ9HAB8 311 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 EML4Q9HC35 981 aaKnown RBP6.2□□□□□ -1.42
USF3-204ENST00000496826 KLHL1Q9NR64 748 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 BABAM1Q9NWV8 329 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 LRFN2Q9ULH4 789 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.2□□□□□ -1.42
USF3-204ENST00000496826 SLC26A4O43511 780 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 TNFRSF21O75509 655 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 YWHAZP63104 245 aaKnown RBP6.2□□□□□ -1.42
USF3-204ENST00000496826 MON1BQ7L1V2 547 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 SAAL1Q96ER3 474 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 STRBPQ96SI9 672 aaKnown RBP6.2□□□□□ -1.42
USF3-204ENST00000496826 NLRP2Q9NX02 1062 aa6.2□□□□□ -1.42
USF3-204ENST00000496826 SCN3BQ9NY72 215 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms